Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm12452-201ENSMUST00000117128 331 ntBASIC15.42■□□□□ 0.06
Cux1P53564 Olfr122-201ENSMUST00000119082 993 ntBASIC15.42■□□□□ 0.06
Cux1P53564 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cux1P53564 Gm46142-201ENSMUST00000213332 481 ntBASIC15.42■□□□□ 0.06
Cux1P53564 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC15.42■□□□□ 0.06
Cux1P53564 AC154669.1-201ENSMUST00000224405 482 ntBASIC15.42■□□□□ 0.06
Cux1P53564 AC156561.1-201ENSMUST00000224774 233 ntBASIC15.42■□□□□ 0.06
Cux1P53564 AC163038.2-201ENSMUST00000224851 650 ntBASIC15.42■□□□□ 0.06
Cux1P53564 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Cux1P53564 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Cux1P53564 Defa21-201ENSMUST00000076754 418 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cux1P53564 Defa22-201ENSMUST00000098897 419 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cux1P53564 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cux1P53564 Ap3m1-201ENSMUST00000022371 1770 ntTSL 5 BASIC15.42■□□□□ 0.06
Cux1P53564 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cux1P53564 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cux1P53564 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cux1P53564 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cux1P53564 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cux1P53564 Tefm-201ENSMUST00000050207 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cux1P53564 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cux1P53564 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cux1P53564 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC15.41■□□□□ 0.06
Cux1P53564 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cux1P53564 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC15.41■□□□□ 0.06
Cux1P53564 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cux1P53564 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cux1P53564 Ephb4-202ENSMUST00000111054 3784 ntTSL 5 BASIC15.41■□□□□ 0.06
Cux1P53564 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cux1P53564 Adra1a-205ENSMUST00000161339 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cux1P53564 Oc90-201ENSMUST00000060522 1909 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cux1P53564 AC154314.2-201ENSMUST00000223677 3502 ntBASIC15.41■□□□□ 0.06
Cux1P53564 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC15.41■□□□□ 0.06
Cux1P53564 Fmo4-201ENSMUST00000028014 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cux1P53564 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Cux1P53564 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC15.41■□□□□ 0.06
Cux1P53564 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cux1P53564 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC15.41■□□□□ 0.06
Cux1P53564 Prkar1a-202ENSMUST00000106676 962 ntTSL 2 BASIC15.41■□□□□ 0.06
Cux1P53564 Gm14278-201ENSMUST00000117381 878 ntBASIC15.41■□□□□ 0.06
Cux1P53564 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cux1P53564 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC15.41■□□□□ 0.06
Cux1P53564 Gm20463-201ENSMUST00000174756 366 ntTSL 3 BASIC15.41■□□□□ 0.06
Cux1P53564 Gm26739-201ENSMUST00000181041 427 ntTSL 3 BASIC15.41■□□□□ 0.06
Cux1P53564 Pantr1-211ENSMUST00000186656 647 ntTSL 3 BASIC15.41■□□□□ 0.06
Cux1P53564 1810007D17Rik-201ENSMUST00000187629 742 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cux1P53564 Ighv1-57-201ENSMUST00000194898 349 ntBASIC15.41■□□□□ 0.06
Cux1P53564 Gm6637-201ENSMUST00000204884 382 ntBASIC15.41■□□□□ 0.06
Cux1P53564 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC15.41■□□□□ 0.06
Cux1P53564 Cbr1-201ENSMUST00000039659 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cux1P53564 Mir195a-201ENSMUST00000083477 94 ntBASIC15.41■□□□□ 0.06
Cux1P53564 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cux1P53564 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cux1P53564 Kcne1-201ENSMUST00000051705 3155 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cux1P53564 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cux1P53564 Timm21-201ENSMUST00000025547 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cux1P53564 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cux1P53564 Gm26700-201ENSMUST00000181480 1957 ntTSL 5 BASIC15.4■□□□□ 0.06
Cux1P53564 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cux1P53564 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC15.4■□□□□ 0.06
Cux1P53564 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cux1P53564 Gm11307-201ENSMUST00000121088 929 ntBASIC15.4■□□□□ 0.06
Cux1P53564 Gm13710-201ENSMUST00000126679 818 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cux1P53564 Gm15635-201ENSMUST00000127834 371 ntTSL 3 BASIC15.4■□□□□ 0.06
Cux1P53564 Gm12962-201ENSMUST00000138697 580 ntTSL 2 BASIC15.4■□□□□ 0.06
Cux1P53564 9230117E06Rik-201ENSMUST00000159309 497 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cux1P53564 Gm45510-201ENSMUST00000210059 638 ntTSL 5 BASIC15.4■□□□□ 0.06
Cux1P53564 Gm3473-201ENSMUST00000216911 1096 ntBASIC15.4■□□□□ 0.06
Cux1P53564 AC105950.2-201ENSMUST00000220938 368 ntBASIC15.4■□□□□ 0.06
Cux1P53564 Ctsw-201ENSMUST00000025844 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cux1P53564 Spaca5-201ENSMUST00000040437 640 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cux1P53564 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cux1P53564 Olfr1419-201ENSMUST00000087857 1160 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cux1P53564 Aadacl4-201ENSMUST00000094510 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cux1P53564 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cux1P53564 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cux1P53564 Gm14735-201ENSMUST00000121772 3088 ntBASIC15.4■□□□□ 0.06
Cux1P53564 Rabep1-206ENSMUST00000177731 3167 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cux1P53564 Eif2b3-201ENSMUST00000070610 1369 ntTSL 5 BASIC15.4■□□□□ 0.06
Cux1P53564 Cel-201ENSMUST00000028161 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cux1P53564 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cux1P53564 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cux1P53564 Eef1g-201ENSMUST00000052248 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cux1P53564 Sag-201ENSMUST00000077772 1719 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cux1P53564 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cux1P53564 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cux1P53564 Bnip3-201ENSMUST00000106112 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cux1P53564 Gm10398-201ENSMUST00000100826 397 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cux1P53564 Gm12664-201ENSMUST00000118306 913 ntBASIC15.39■□□□□ 0.05
Cux1P53564 Gm8606-201ENSMUST00000121482 888 ntBASIC15.39■□□□□ 0.05
Cux1P53564 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cux1P53564 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC15.39■□□□□ 0.05
Cux1P53564 Ccl19-203ENSMUST00000140546 773 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cux1P53564 Gm37113-201ENSMUST00000195675 1157 ntBASIC15.39■□□□□ 0.05
Cux1P53564 Upp1-201ENSMUST00000020677 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cux1P53564 Gm7210-201ENSMUST00000209309 1067 ntBASIC15.39■□□□□ 0.05
Cux1P53564 Gm19228-201ENSMUST00000214030 717 ntBASIC15.39■□□□□ 0.05
Cux1P53564 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cux1P53564 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cux1P53564 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms