Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Fv4P11370 Ssrp1-209ENSMUST00000168266 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 CT009601.1-201ENSMUST00000225567 2705 ntBASIC9.8□□□□□ -0.84
Fv4P11370 Vgll3-202ENSMUST00000227997 1383 ntBASIC9.8□□□□□ -0.84
Fv4P11370 Lrrc14b-201ENSMUST00000022064 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Fv4P11370 Smgc-204ENSMUST00000109277 855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC9.8□□□□□ -0.84
Fv4P11370 Gm15041-201ENSMUST00000119048 756 ntBASIC9.8□□□□□ -0.84
Fv4P11370 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC9.8□□□□□ -0.84
Fv4P11370 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC9.8□□□□□ -0.84
Fv4P11370 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 Gm43506-201ENSMUST00000200675 753 ntBASIC9.8□□□□□ -0.84
Fv4P11370 Gm26782-203ENSMUST00000227103 751 ntBASIC9.8□□□□□ -0.84
Fv4P11370 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Fv4P11370 Gm9946-201ENSMUST00000008011 1025 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 P2rx7-201ENSMUST00000031425 1605 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 Pdpr-201ENSMUST00000039333 4938 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC9.8□□□□□ -0.84
Fv4P11370 Isx-201ENSMUST00000034034 1793 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 Zfp58-201ENSMUST00000076123 2391 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 Trib2-201ENSMUST00000020922 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC9.8□□□□□ -0.84
Fv4P11370 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 Tbx22-202ENSMUST00000118986 3035 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Fv4P11370 Bcl2l14-202ENSMUST00000111960 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 Rnf111-202ENSMUST00000113595 4735 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Fv4P11370 Rnf111-207ENSMUST00000215848 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 AC140393.1-201ENSMUST00000227959 1581 ntBASIC9.8□□□□□ -0.84
Fv4P11370 Entpd1-204ENSMUST00000134063 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Fv4P11370 Ifitm7-202ENSMUST00000178021 1823 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Fv4P11370 Mitf-202ENSMUST00000043637 4881 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Kctd7-201ENSMUST00000040616 4291 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Fv4P11370 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Gm45757-201ENSMUST00000211835 1480 ntBASIC9.79□□□□□ -0.84
Fv4P11370 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Fv4P11370 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Fv4P11370 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Clasp2-203ENSMUST00000166734 4108 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
Fv4P11370 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Gm43167-201ENSMUST00000202001 1606 ntBASIC9.79□□□□□ -0.84
Fv4P11370 Lsm6-203ENSMUST00000130325 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Zmat2-201ENSMUST00000001419 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Nfia-203ENSMUST00000092532 9382 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Rnf13-201ENSMUST00000041826 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC9.79□□□□□ -0.84
Fv4P11370 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC9.79□□□□□ -0.84
Fv4P11370 Gm14219-201ENSMUST00000120414 288 ntBASIC9.79□□□□□ -0.84
Fv4P11370 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC9.79□□□□□ -0.84
Fv4P11370 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC9.79□□□□□ -0.84
Fv4P11370 Gm17090-201ENSMUST00000171768 490 ntTSL 5 BASIC9.79□□□□□ -0.84
Fv4P11370 Gm24514-201ENSMUST00000174961 285 ntBASIC9.79□□□□□ -0.84
Fv4P11370 Gm3534-201ENSMUST00000182522 1001 ntBASIC9.79□□□□□ -0.84
Fv4P11370 Gm42430-201ENSMUST00000197209 616 ntBASIC9.79□□□□□ -0.84
Fv4P11370 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Fv4P11370 Gm9771-201ENSMUST00000198267 1137 ntBASIC9.79□□□□□ -0.84
Fv4P11370 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC9.79□□□□□ -0.84
Fv4P11370 Gm18119-201ENSMUST00000219972 616 ntBASIC9.79□□□□□ -0.84
Fv4P11370 AC130477.1-201ENSMUST00000226982 420 ntBASIC9.79□□□□□ -0.84
Fv4P11370 Nsmce2-203ENSMUST00000227173 1122 ntBASIC9.79□□□□□ -0.84
Fv4P11370 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Tyw3-201ENSMUST00000052774 4490 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 D2hgdh-202ENSMUST00000112881 3459 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Fubp1-220ENSMUST00000200524 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Siglech-203ENSMUST00000121492 1655 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC9.79□□□□□ -0.84
Fv4P11370 Arhgap45-203ENSMUST00000105373 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Tnxa-201ENSMUST00000173277 2975 ntBASIC9.79□□□□□ -0.84
Fv4P11370 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
Fv4P11370 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Fv4P11370 Cpt1b-201ENSMUST00000109313 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Dubr-202ENSMUST00000186535 2896 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Pik3c3-203ENSMUST00000115812 3257 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Fv4P11370 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Poteg-201ENSMUST00000081321 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Fv4P11370 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Fv4P11370 Mbd1-201ENSMUST00000097530 2833 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Fv4P11370 Xdh-201ENSMUST00000024866 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Fv4P11370 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Fv4P11370 Gm13615-201ENSMUST00000120242 1612 ntBASIC9.78□□□□□ -0.84
Fv4P11370 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms