Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gm11662-201ENSMUST00000121389 1193 ntBASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Gm15520-201ENSMUST00000132097 1203 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 1700049E15Rik-202ENSMUST00000152737 921 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Snhg17-208ENSMUST00000154242 346 ntTSL 3 BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Gm15749-201ENSMUST00000161848 612 ntTSL 2 BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 A330094K24Rik-201ENSMUST00000180530 1027 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Gm42794-201ENSMUST00000197636 835 ntTSL 3 BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Gm5865-201ENSMUST00000198713 637 ntBASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Gm43442-201ENSMUST00000202865 414 ntBASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Gm8083-201ENSMUST00000203976 475 ntBASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Gm45756-201ENSMUST00000212491 407 ntBASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 AC132384.1-201ENSMUST00000219908 1195 ntBASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Olfr304-201ENSMUST00000077210 1002 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Gprc5d-201ENSMUST00000032327 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc188F6WEU2 Slc17a3-203ENSMUST00000110422 1764 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Gm42974-201ENSMUST00000199556 2654 ntBASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Add2-201ENSMUST00000032069 3119 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Ighv8-6-201ENSMUST00000103524 301 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Gm7910-201ENSMUST00000117896 835 ntBASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Gm8644-201ENSMUST00000118619 596 ntBASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Gm13655-201ENSMUST00000119695 745 ntBASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Zfp978-202ENSMUST00000154154 1250 ntAPPRIS P5 TSL 5 BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Snca-202ENSMUST00000163779 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Gm17169-201ENSMUST00000171382 351 ntBASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Gm21370-201ENSMUST00000177659 573 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 n-R5s210-201ENSMUST00000177688 119 ntBASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Gm21188-201ENSMUST00000178618 573 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Gm28677-202ENSMUST00000186904 615 ntBASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Gm28199-201ENSMUST00000187127 619 ntTSL 3 BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Gm29434-201ENSMUST00000187426 260 ntBASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Gm10522-201ENSMUST00000194503 1163 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Gm43693-201ENSMUST00000196072 1249 ntBASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Gm44131-201ENSMUST00000203036 394 ntBASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Gm44331-201ENSMUST00000203217 388 ntBASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Rab38-202ENSMUST00000208478 579 ntTSL 3 BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Gm18780-201ENSMUST00000209594 574 ntBASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Gm34105-201ENSMUST00000214812 571 ntTSL 5 BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Gm46391-201ENSMUST00000220704 203 ntBASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Lyg1-201ENSMUST00000027254 800 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Gm5499-201ENSMUST00000090731 885 ntBASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Olfr237-ps1-201ENSMUST00000095953 1000 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Olfr323-203ENSMUST00000214132 1916 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 BC051665-201ENSMUST00000026078 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc188F6WEU2 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms