Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Inpp4b-212ENSMUST00000215332 5486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Sec61a2Q9JLR1 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Sec61a2Q9JLR1 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Sec61a2Q9JLR1 Col4a5-201ENSMUST00000112930 6285 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Sec61a2Q9JLR1 Rp1l1-201ENSMUST00000058229 6684 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Sec61a2Q9JLR1 Aph1b-201ENSMUST00000034934 4910 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Sec61a2Q9JLR1 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
Sec61a2Q9JLR1 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Sec61a2Q9JLR1 Gabrb3-206ENSMUST00000196198 4348 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Sec61a2Q9JLR1 Gm12381-201ENSMUST00000126314 2186 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Sec61a2Q9JLR1 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Sec61a2Q9JLR1 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Sec61a2Q9JLR1 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Sec61a2Q9JLR1 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Sec61a2Q9JLR1 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Sec61a2Q9JLR1 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC9.21□□□□□ -0.93
Sec61a2Q9JLR1 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Sec61a2Q9JLR1 March6-201ENSMUST00000090227 6260 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Sec61a2Q9JLR1 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC9.21□□□□□ -0.93
Sec61a2Q9JLR1 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Sec61a2Q9JLR1 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Sec61a2Q9JLR1 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Sec61a2Q9JLR1 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Sec61a2Q9JLR1 Gm43167-201ENSMUST00000202001 1606 ntBASIC9.21□□□□□ -0.93
Sec61a2Q9JLR1 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Sec61a2Q9JLR1 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Sec61a2Q9JLR1 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Sec61a2Q9JLR1 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
Sec61a2Q9JLR1 Klhdc7a-201ENSMUST00000105031 7807 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Sec61a2Q9JLR1 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.93
Sec61a2Q9JLR1 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Sec61a2Q9JLR1 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm8482-201ENSMUST00000117972 471 ntBASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm13841-201ENSMUST00000118829 483 ntBASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm11449-201ENSMUST00000119175 476 ntBASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm11993-201ENSMUST00000121861 820 ntBASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm8210-201ENSMUST00000178557 483 ntBASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm15454-201ENSMUST00000179718 483 ntBASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm7583-201ENSMUST00000182941 1005 ntBASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm5267-201ENSMUST00000191574 1045 ntBASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm37141-201ENSMUST00000191938 422 ntBASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm7357-201ENSMUST00000195361 2991 ntBASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm42751-201ENSMUST00000198065 559 ntBASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm44640-201ENSMUST00000206894 247 ntBASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 BC106175-202ENSMUST00000219344 1213 ntBASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 AC154806.7-201ENSMUST00000227998 202 ntBASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm6344-201ENSMUST00000075962 483 ntBASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Sfmbt2-202ENSMUST00000114861 1813 ntTSL 5 BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm6170-201ENSMUST00000187672 1388 ntBASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Hdac7-207ENSMUST00000120683 3701 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Sec61a2Q9JLR1 Trim9-211ENSMUST00000223160 3574 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm16387-201ENSMUST00000180990 2632 ntBASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Glyctk-201ENSMUST00000036382 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Sgo2b-201ENSMUST00000179944 3739 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Dido1-206ENSMUST00000103057 4906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm37003-201ENSMUST00000194702 2827 ntBASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Pcdhb20-201ENSMUST00000052179 3559 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Abcc9-206ENSMUST00000205202 4752 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Ift172-201ENSMUST00000041565 5403 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm11996-201ENSMUST00000117538 915 ntBASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm11475-201ENSMUST00000118482 476 ntBASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm13039-201ENSMUST00000118638 794 ntBASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm11701-201ENSMUST00000121277 1142 ntBASIC9.2□□□□□ -0.94
Sec61a2Q9JLR1 Gm12453-201ENSMUST00000121981 331 ntBASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms