Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Gm13997-201ENSMUST00000155641 336 ntTSL 3 BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Gm16337-201ENSMUST00000160368 917 ntTSL 3 BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Gm6669-201ENSMUST00000179088 997 ntBASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Gm2939-201ENSMUST00000198496 478 ntBASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Gm43607-201ENSMUST00000199524 336 ntTSL 3 BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 1700012J15Rik-201ENSMUST00000203458 471 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Ifnb1-201ENSMUST00000055671 750 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Olfr978-201ENSMUST00000057161 936 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Gm9999-201ENSMUST00000070660 486 ntAPPRIS P5 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Rarres2-201ENSMUST00000009425 731 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Gm10577-201ENSMUST00000097954 399 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 AC126459.1-201ENSMUST00000214791 2123 ntBASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Rab3gap1-207ENSMUST00000212506 2967 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Gm45088-201ENSMUST00000207066 1408 ntBASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Gm12381-201ENSMUST00000126314 2186 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 Trdv2-1-201ENSMUST00000103677 345 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 S100a16-203ENSMUST00000107331 723 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 Inca1-204ENSMUST00000108543 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 Asgr1-203ENSMUST00000108585 1169 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 Olfr409-ps1-201ENSMUST00000118809 971 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 Gm13670-201ENSMUST00000120947 461 ntBASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 Gm9146-201ENSMUST00000182254 1006 ntBASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 Gm42952-203ENSMUST00000197784 798 ntTSL 3 BASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 Alg14-204ENSMUST00000199554 441 ntTSL 3 BASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 9230112J17Rik-202ENSMUST00000217430 764 ntTSL 3 BASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 Gm25973-201ENSMUST00000083717 127 ntBASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Pcdh15Q99PJ1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh15Q99PJ1 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh15Q99PJ1 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh15Q99PJ1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh15Q99PJ1 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh15Q99PJ1 Ripply1-201ENSMUST00000101217 811 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh15Q99PJ1 Ighv1-67-201ENSMUST00000103538 294 ntBASIC11.27□□□□□ -0.61
Pcdh15Q99PJ1 Gm12645-201ENSMUST00000117297 275 ntBASIC11.27□□□□□ -0.61
Pcdh15Q99PJ1 Gm16418-201ENSMUST00000118577 171 ntBASIC11.27□□□□□ -0.61
Pcdh15Q99PJ1 Cdk2ap2-203ENSMUST00000174149 386 ntTSL 2 BASIC11.27□□□□□ -0.61
Pcdh15Q99PJ1 Gm20463-201ENSMUST00000174756 366 ntTSL 3 BASIC11.27□□□□□ -0.61
Pcdh15Q99PJ1 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC11.27□□□□□ -0.61
Pcdh15Q99PJ1 Gm9946-201ENSMUST00000008011 1025 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh15Q99PJ1 4933402D24Rik-201ENSMUST00000027102 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh15Q99PJ1 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh15Q99PJ1 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Pcdh15Q99PJ1 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdh15Q99PJ1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Eif3l-201ENSMUST00000040518 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Gls-203ENSMUST00000114512 2042 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Ctss-202ENSMUST00000116304 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 AC164437.1-201ENSMUST00000227321 2308 ntBASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Ankk1-201ENSMUST00000034792 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Gm5409-201ENSMUST00000160346 698 ntBASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Gm8379-201ENSMUST00000165448 1192 ntBASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Gm3261-201ENSMUST00000166886 481 ntBASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Lsm5-201ENSMUST00000170382 494 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Gm2907-201ENSMUST00000181256 1192 ntBASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Gm44156-201ENSMUST00000203885 1189 ntBASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Gm6375-201ENSMUST00000205201 1145 ntBASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Gm5737-201ENSMUST00000208668 1272 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Gm6989-201ENSMUST00000218409 654 ntBASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 AC160550.2-202ENSMUST00000227812 1861 ntBASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Morn3-202ENSMUST00000045843 904 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Lnpk-201ENSMUST00000064503 3195 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdh15Q99PJ1 Ccdc159-201ENSMUST00000006403 1531 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms