Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clrn1Q8K445 Atp7b-201ENSMUST00000006742 6505 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clrn1Q8K445 Gm44888-201ENSMUST00000209119 2541 ntBASIC9.63□□□□□ -0.87
Clrn1Q8K445 Ap3m1-206ENSMUST00000154460 6732 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clrn1Q8K445 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Clrn1Q8K445 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clrn1Q8K445 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clrn1Q8K445 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clrn1Q8K445 Dhx35-202ENSMUST00000109478 3284 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Clrn1Q8K445 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clrn1Q8K445 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Clrn1Q8K445 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clrn1Q8K445 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC9.63□□□□□ -0.87
Clrn1Q8K445 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Clrn1Q8K445 CT025645.2-201ENSMUST00000223278 3827 ntBASIC9.63□□□□□ -0.87
Clrn1Q8K445 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clrn1Q8K445 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clrn1Q8K445 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Clrn1Q8K445 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC9.63□□□□□ -0.87
Clrn1Q8K445 AC153498.1-201ENSMUST00000219775 2722 ntBASIC9.62□□□□□ -0.87
Clrn1Q8K445 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Clrn1Q8K445 5330439K02Rik-201ENSMUST00000180953 2312 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC9.62□□□□□ -0.87
Clrn1Q8K445 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 AC110091.2-201ENSMUST00000215107 1512 ntTSL 5 BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Dhx30-219ENSMUST00000199529 4373 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Gm37975-201ENSMUST00000195494 2099 ntBASIC9.62□□□□□ -0.87
Clrn1Q8K445 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Snora68-201ENSMUST00000104375 131 ntBASIC9.62□□□□□ -0.87
Clrn1Q8K445 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Gm12028-201ENSMUST00000118065 436 ntBASIC9.62□□□□□ -0.87
Clrn1Q8K445 Gm11957-201ENSMUST00000118304 779 ntBASIC9.62□□□□□ -0.87
Clrn1Q8K445 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC9.62□□□□□ -0.87
Clrn1Q8K445 Gm12712-201ENSMUST00000120676 801 ntBASIC9.62□□□□□ -0.87
Clrn1Q8K445 Gm6881-201ENSMUST00000121811 833 ntBASIC9.62□□□□□ -0.87
Clrn1Q8K445 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Gm18555-201ENSMUST00000197935 584 ntBASIC9.62□□□□□ -0.87
Clrn1Q8K445 1700012J15Rik-201ENSMUST00000203458 471 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Gm44420-201ENSMUST00000203669 490 ntBASIC9.62□□□□□ -0.87
Clrn1Q8K445 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Gm7904-201ENSMUST00000217049 465 ntBASIC9.62□□□□□ -0.87
Clrn1Q8K445 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Gm9791-201ENSMUST00000060997 447 ntBASIC9.62□□□□□ -0.87
Clrn1Q8K445 Gm10053-201ENSMUST00000073080 949 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Gm42731-201ENSMUST00000201839 1641 ntBASIC9.62□□□□□ -0.87
Clrn1Q8K445 5430430B14Rik-201ENSMUST00000209427 1630 ntBASIC9.62□□□□□ -0.87
Clrn1Q8K445 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Sdhaf3-201ENSMUST00000040826 4323 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Ttll7-203ENSMUST00000106134 2664 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 2810471M01Rik-201ENSMUST00000146554 1597 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Gm38034-201ENSMUST00000193915 2069 ntBASIC9.62□□□□□ -0.87
Clrn1Q8K445 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Clrn1Q8K445 Sulf2-202ENSMUST00000109249 4580 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Gm5310-201ENSMUST00000197861 1511 ntBASIC9.61□□□□□ -0.87
Clrn1Q8K445 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Gm44699-201ENSMUST00000208229 5083 ntTSL 5 BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Gm37084-201ENSMUST00000191688 5898 ntBASIC9.61□□□□□ -0.87
Clrn1Q8K445 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Gm38413-202ENSMUST00000198449 2348 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC9.61□□□□□ -0.87
Clrn1Q8K445 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms