Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm9771-201ENSMUST00000198267 1137 ntBASIC12.21□□□□□ -0.45
Vps54Q5SPW0 Gm17936-201ENSMUST00000199413 988 ntBASIC12.21□□□□□ -0.45
Vps54Q5SPW0 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vps54Q5SPW0 Tas2r141-ps4-201ENSMUST00000205072 946 ntBASIC12.21□□□□□ -0.45
Vps54Q5SPW0 Gm29689-201ENSMUST00000221076 589 ntBASIC12.21□□□□□ -0.45
Vps54Q5SPW0 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps54Q5SPW0 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Vps54Q5SPW0 Olfr1115-201ENSMUST00000081986 1102 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Vps54Q5SPW0 Olfr1229-201ENSMUST00000099788 1019 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Vps54Q5SPW0 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vps54Q5SPW0 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC12.21□□□□□ -0.46
Vps54Q5SPW0 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps54Q5SPW0 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps54Q5SPW0 Ppcdc-201ENSMUST00000085709 2744 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps54Q5SPW0 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Vps54Q5SPW0 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Vps54Q5SPW0 Gm45153-201ENSMUST00000205957 1901 ntBASIC12.21□□□□□ -0.46
Vps54Q5SPW0 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps54Q5SPW0 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Vps54Q5SPW0 Gm7190-201ENSMUST00000118669 1452 ntBASIC12.21□□□□□ -0.46
Vps54Q5SPW0 Fam187b-201ENSMUST00000058093 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps54Q5SPW0 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vps54Q5SPW0 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm43362-201ENSMUST00000198192 2470 ntBASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Eno2-202ENSMUST00000112476 2386 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Apol7a-204ENSMUST00000176074 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm13426-201ENSMUST00000117887 795 ntBASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm12377-201ENSMUST00000118656 252 ntBASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm11473-201ENSMUST00000118980 359 ntBASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm15636-201ENSMUST00000119205 668 ntBASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm16480-201ENSMUST00000120439 832 ntBASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm11988-201ENSMUST00000122321 1069 ntBASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gstm1-202ENSMUST00000126593 828 ntTSL 3 BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm4943-201ENSMUST00000132879 424 ntBASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm12977-201ENSMUST00000133742 942 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm8203-201ENSMUST00000173192 387 ntBASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm33707-201ENSMUST00000195135 569 ntBASIC12.2□□□□□ -0.46
Vps54Q5SPW0 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm30055-201ENSMUST00000203175 803 ntBASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm44204-201ENSMUST00000204722 737 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 AC124356.1-201ENSMUST00000221469 698 ntBASIC12.2□□□□□ -0.46
Vps54Q5SPW0 AC105408.1-201ENSMUST00000227771 802 ntBASIC12.2□□□□□ -0.46
Vps54Q5SPW0 AC163646.3-202ENSMUST00000228685 691 ntBASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm8730-201ENSMUST00000076373 954 ntBASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Hdhd2-201ENSMUST00000026485 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Pdha2-201ENSMUST00000057860 2352 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Pklr-202ENSMUST00000107482 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Kcne1-201ENSMUST00000051705 3155 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm6225-201ENSMUST00000181558 1700 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Poteg-201ENSMUST00000081321 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vps54Q5SPW0 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Ube2q1-202ENSMUST00000196726 1650 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Drc3-203ENSMUST00000108722 1858 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 A830018L16Rik-203ENSMUST00000137824 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Birc3-202ENSMUST00000115672 2909 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Nox1-204ENSMUST00000159259 1581 ntTSL 5 BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Trpc5-201ENSMUST00000040184 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Stk26-201ENSMUST00000033444 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Vps54Q5SPW0 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms