Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm12751-201ENSMUST00000122336 381 ntBASIC9.41□□□□□ -0.9
Spg11Q3UHA3 4930479D17Rik-201ENSMUST00000146754 740 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Pcsk2os1-202ENSMUST00000156780 527 ntTSL 3 BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Gm20587-201ENSMUST00000186367 1186 ntBASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Gm2939-201ENSMUST00000198496 478 ntBASIC9.41□□□□□ -0.9
Spg11Q3UHA3 CT030664.1-201ENSMUST00000223639 908 ntBASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Pglyrp4-201ENSMUST00000047745 1218 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Smim7-201ENSMUST00000058733 642 ntTSL 2 BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Sec31b-202ENSMUST00000111985 3548 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Vgll3-202ENSMUST00000227997 1383 ntBASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Gm5721-201ENSMUST00000119845 1696 ntBASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Gm8752-201ENSMUST00000173427 1694 ntBASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.41□□□□□ -0.9
Spg11Q3UHA3 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Gm11668-201ENSMUST00000119655 701 ntBASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Gm13675-201ENSMUST00000120616 529 ntBASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Gm12570-201ENSMUST00000122047 1030 ntBASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Mir3093-201ENSMUST00000175247 87 ntBASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Gm28244-201ENSMUST00000189342 356 ntTSL 5 BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Gm3176-201ENSMUST00000200920 1249 ntBASIC9.41□□□□□ -0.9
Spg11Q3UHA3 AC160929.1-201ENSMUST00000221247 415 ntBASIC9.41□□□□□ -0.9
Spg11Q3UHA3 AC165260.5-201ENSMUST00000224640 1247 ntBASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Fcgr3-204ENSMUST00000169017 1324 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Spg11Q3UHA3 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Top3a-201ENSMUST00000002891 3741 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Gm19337-201ENSMUST00000218100 1584 ntBASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Crp-201ENSMUST00000038495 1695 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Ccl19-201ENSMUST00000102957 745 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Mir467f-201ENSMUST00000116923 120 ntBASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Gm15368-201ENSMUST00000120438 858 ntBASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Gm15224-201ENSMUST00000120501 388 ntBASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 4930528P14Rik-201ENSMUST00000152815 509 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Gm43802-201ENSMUST00000197826 637 ntBASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Gm42871-201ENSMUST00000199333 315 ntTSL 5 BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 AC160991.2-201ENSMUST00000223784 1135 ntBASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Rasgrf1-201ENSMUST00000034909 853 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Mtfr1-203ENSMUST00000119865 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Spg11Q3UHA3 Gm44241-201ENSMUST00000203230 1662 ntBASIC9.4□□□□□ -0.91
Spg11Q3UHA3 Gm45675-201ENSMUST00000211202 3429 ntBASIC9.4□□□□□ -0.91
Spg11Q3UHA3 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Spg11Q3UHA3 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Spg11Q3UHA3 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Spg11Q3UHA3 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Spg11Q3UHA3 Gm12003-201ENSMUST00000118518 1105 ntBASIC9.4□□□□□ -0.91
Spg11Q3UHA3 Gm5388-201ENSMUST00000120059 1117 ntBASIC9.4□□□□□ -0.91
Spg11Q3UHA3 Prss28-201ENSMUST00000015267 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Spg11Q3UHA3 Lyrm7os-201ENSMUST00000154044 928 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Spg11Q3UHA3 Gm24039-201ENSMUST00000157878 132 ntBASIC9.4□□□□□ -0.91
Spg11Q3UHA3 1190005I06Rik-203ENSMUST00000180677 533 ntAPPRIS ALT2 TSL 3 BASIC9.4□□□□□ -0.91
Spg11Q3UHA3 Rtp4-203ENSMUST00000210901 1158 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Spg11Q3UHA3 Mkl2-202ENSMUST00000056715 618 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Spg11Q3UHA3 Olfr1115-201ENSMUST00000081986 1102 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Spg11Q3UHA3 Mir212-201ENSMUST00000083656 91 ntBASIC9.4□□□□□ -0.91
Spg11Q3UHA3 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Spg11Q3UHA3 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Spg11Q3UHA3 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Spg11Q3UHA3 Fut8-202ENSMUST00000171770 2765 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Spg11Q3UHA3 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Spg11Q3UHA3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Spg11Q3UHA3 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Spg11Q3UHA3 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms