Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim63Q38HM4 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim63Q38HM4 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC8.32□□□□□ -1.08
Trim63Q38HM4 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Gm11814-201ENSMUST00000119515 929 ntBASIC8.32□□□□□ -1.08
Trim63Q38HM4 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Gm27486-201ENSMUST00000184923 80 ntBASIC8.32□□□□□ -1.08
Trim63Q38HM4 Gm21139-201ENSMUST00000186594 877 ntBASIC8.32□□□□□ -1.08
Trim63Q38HM4 Gm21156-201ENSMUST00000189693 869 ntBASIC8.32□□□□□ -1.08
Trim63Q38HM4 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Gm8515-201ENSMUST00000194852 576 ntBASIC8.32□□□□□ -1.08
Trim63Q38HM4 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Gm44155-201ENSMUST00000203923 412 ntBASIC8.32□□□□□ -1.08
Trim63Q38HM4 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC8.32□□□□□ -1.08
Trim63Q38HM4 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Gm5130-201ENSMUST00000210233 959 ntBASIC8.32□□□□□ -1.08
Trim63Q38HM4 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Gm9770-201ENSMUST00000075147 811 ntBASIC8.32□□□□□ -1.08
Trim63Q38HM4 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Gm10268-201ENSMUST00000085340 555 ntBASIC8.32□□□□□ -1.08
Trim63Q38HM4 Gm16023-201ENSMUST00000137752 2490 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Rfx2-202ENSMUST00000086801 3278 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim63Q38HM4 2010111I01Rik-202ENSMUST00000091560 3509 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Smok4a-202ENSMUST00000144015 2317 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Gm40999-201ENSMUST00000222586 3387 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Gm26703-202ENSMUST00000181506 2982 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Samd3-201ENSMUST00000060716 1874 ntAPPRIS P4 TSL 5 BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Aasdh-202ENSMUST00000120963 3694 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Prdm6-202ENSMUST00000115398 1474 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
Trim63Q38HM4 Ube2k-207ENSMUST00000202082 4506 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Gm15127-202ENSMUST00000101190 1972 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Gm43737-201ENSMUST00000199915 2740 ntBASIC8.31□□□□□ -1.08
Trim63Q38HM4 Myom1-201ENSMUST00000024847 5354 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC8.31□□□□□ -1.08
Trim63Q38HM4 Gfra2-203ENSMUST00000227697 1323 ntBASIC8.31□□□□□ -1.08
Trim63Q38HM4 Gabrb2-201ENSMUST00000007797 3989 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Cyp2e1-202ENSMUST00000209253 1582 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Gm37262-201ENSMUST00000192816 1818 ntBASIC8.31□□□□□ -1.08
Trim63Q38HM4 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Slc11a2-205ENSMUST00000138843 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Il1bos-202ENSMUST00000156601 2425 ntTSL 2 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Nox1-202ENSMUST00000113275 1694 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Siglech-203ENSMUST00000121492 1655 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Trim36-201ENSMUST00000037011 4544 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Dync1i2-203ENSMUST00000112136 2548 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Apol11b-202ENSMUST00000180949 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Wdr61-202ENSMUST00000118771 3372 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Mynn-201ENSMUST00000047502 3394 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Mak-205ENSMUST00000224740 2354 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Gm16103-201ENSMUST00000163003 1279 ntBASIC8.31□□□□□ -1.08
Trim63Q38HM4 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC8.31□□□□□ -1.08
Trim63Q38HM4 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 CT572999.1-201ENSMUST00000220315 1260 ntBASIC8.31□□□□□ -1.08
Trim63Q38HM4 AC154759.1-201ENSMUST00000224137 1159 ntBASIC8.31□□□□□ -1.08
Trim63Q38HM4 CT485787.1-201ENSMUST00000225617 968 ntBASIC8.31□□□□□ -1.08
Trim63Q38HM4 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Ddb2-202ENSMUST00000111352 2228 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Nr1h4-202ENSMUST00000105296 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms