Protein–RNA interactions for Protein: Q9Z0S2

Lhx2, LIM/homeobox protein Lhx2, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx2Q9Z0S2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx2Q9Z0S2 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.5■□□□□ 0.39
Lhx2Q9Z0S2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx2Q9Z0S2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx2Q9Z0S2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx2Q9Z0S2 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.5■□□□□ 0.39
Lhx2Q9Z0S2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx2Q9Z0S2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx2Q9Z0S2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Lhx2Q9Z0S2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx2Q9Z0S2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx2Q9Z0S2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx2Q9Z0S2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx2Q9Z0S2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx2Q9Z0S2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Lhx2Q9Z0S2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx2Q9Z0S2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Lhx2Q9Z0S2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx2Q9Z0S2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx2Q9Z0S2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx2Q9Z0S2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Lhx2Q9Z0S2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx2Q9Z0S2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx2Q9Z0S2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Lhx2Q9Z0S2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx2Q9Z0S2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx2Q9Z0S2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Lhx2Q9Z0S2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.48■□□□□ 0.39
Lhx2Q9Z0S2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Lhx2Q9Z0S2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.48■□□□□ 0.39
Lhx2Q9Z0S2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Lhx2Q9Z0S2 Gm10493-201ENSMUST00000097270 612 ntBASIC17.48■□□□□ 0.39
Lhx2Q9Z0S2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx2Q9Z0S2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx2Q9Z0S2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Lhx2Q9Z0S2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx2Q9Z0S2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx2Q9Z0S2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx2Q9Z0S2 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.47■□□□□ 0.39
Lhx2Q9Z0S2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx2Q9Z0S2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Lhx2Q9Z0S2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.47■□□□□ 0.39
Lhx2Q9Z0S2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx2Q9Z0S2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx2Q9Z0S2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx2Q9Z0S2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Lhx2Q9Z0S2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.47■□□□□ 0.39
Lhx2Q9Z0S2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx2Q9Z0S2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx2Q9Z0S2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx2Q9Z0S2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Lhx2Q9Z0S2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx2Q9Z0S2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.46■□□□□ 0.39
Lhx2Q9Z0S2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx2Q9Z0S2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx2Q9Z0S2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.46■□□□□ 0.39
Lhx2Q9Z0S2 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.46■□□□□ 0.38
Lhx2Q9Z0S2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Lhx2Q9Z0S2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx2Q9Z0S2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx2Q9Z0S2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx2Q9Z0S2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.45■□□□□ 0.38
Lhx2Q9Z0S2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx2Q9Z0S2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx2Q9Z0S2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Lhx2Q9Z0S2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx2Q9Z0S2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx2Q9Z0S2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx2Q9Z0S2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx2Q9Z0S2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Lhx2Q9Z0S2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.44■□□□□ 0.38
Lhx2Q9Z0S2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Lhx2Q9Z0S2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx2Q9Z0S2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
Lhx2Q9Z0S2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.44■□□□□ 0.38
Lhx2Q9Z0S2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Lhx2Q9Z0S2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx2Q9Z0S2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx2Q9Z0S2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx2Q9Z0S2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.43■□□□□ 0.38
Lhx2Q9Z0S2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx2Q9Z0S2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.43■□□□□ 0.38
Lhx2Q9Z0S2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx2Q9Z0S2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx2Q9Z0S2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx2Q9Z0S2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx2Q9Z0S2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.43■□□□□ 0.38
Lhx2Q9Z0S2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx2Q9Z0S2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx2Q9Z0S2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx2Q9Z0S2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx2Q9Z0S2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx2Q9Z0S2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx2Q9Z0S2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx2Q9Z0S2 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.42■□□□□ 0.38
Lhx2Q9Z0S2 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.42■□□□□ 0.38
Lhx2Q9Z0S2 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.42■□□□□ 0.38
Lhx2Q9Z0S2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx2Q9Z0S2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx2Q9Z0S2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms