Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcb1Q9Z0H3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.53■□□□□ 0.88
Smarcb1Q9Z0H3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Smarcb1Q9Z0H3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcb1Q9Z0H3 Gm42569-201ENSMUST00000200539 472 ntBASIC20.53■□□□□ 0.88
Smarcb1Q9Z0H3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.53■□□□□ 0.88
Smarcb1Q9Z0H3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Smarcb1Q9Z0H3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.53■□□□□ 0.88
Smarcb1Q9Z0H3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcb1Q9Z0H3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcb1Q9Z0H3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.53■□□□□ 0.88
Smarcb1Q9Z0H3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcb1Q9Z0H3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcb1Q9Z0H3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Smarcb1Q9Z0H3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.52■□□□□ 0.88
Smarcb1Q9Z0H3 Gm27405-201ENSMUST00000184201 112 ntBASIC20.52■□□□□ 0.88
Smarcb1Q9Z0H3 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.52■□□□□ 0.88
Smarcb1Q9Z0H3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcb1Q9Z0H3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Smarcb1Q9Z0H3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcb1Q9Z0H3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcb1Q9Z0H3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.51■□□□□ 0.87
Smarcb1Q9Z0H3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Smarcb1Q9Z0H3 Gm7291-201ENSMUST00000199147 382 ntBASIC20.51■□□□□ 0.87
Smarcb1Q9Z0H3 Gm10033-202ENSMUST00000211874 928 ntBASIC20.51■□□□□ 0.87
Smarcb1Q9Z0H3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcb1Q9Z0H3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcb1Q9Z0H3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcb1Q9Z0H3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcb1Q9Z0H3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcb1Q9Z0H3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcb1Q9Z0H3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Smarcb1Q9Z0H3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcb1Q9Z0H3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcb1Q9Z0H3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcb1Q9Z0H3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcb1Q9Z0H3 Gm26571-201ENSMUST00000181399 666 ntBASIC20.5■□□□□ 0.87
Smarcb1Q9Z0H3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.5■□□□□ 0.87
Smarcb1Q9Z0H3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Smarcb1Q9Z0H3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Smarcb1Q9Z0H3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcb1Q9Z0H3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcb1Q9Z0H3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcb1Q9Z0H3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Smarcb1Q9Z0H3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcb1Q9Z0H3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.49■□□□□ 0.87
Smarcb1Q9Z0H3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Smarcb1Q9Z0H3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcb1Q9Z0H3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.49■□□□□ 0.87
Smarcb1Q9Z0H3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcb1Q9Z0H3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcb1Q9Z0H3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcb1Q9Z0H3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcb1Q9Z0H3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcb1Q9Z0H3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcb1Q9Z0H3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
Smarcb1Q9Z0H3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.48■□□□□ 0.87
Smarcb1Q9Z0H3 Gm9988-201ENSMUST00000069786 435 ntBASIC20.48■□□□□ 0.87
Smarcb1Q9Z0H3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Smarcb1Q9Z0H3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcb1Q9Z0H3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcb1Q9Z0H3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcb1Q9Z0H3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcb1Q9Z0H3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcb1Q9Z0H3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Smarcb1Q9Z0H3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcb1Q9Z0H3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcb1Q9Z0H3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Smarcb1Q9Z0H3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcb1Q9Z0H3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.47■□□□□ 0.87
Smarcb1Q9Z0H3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Smarcb1Q9Z0H3 AV356131-201ENSMUST00000206201 750 ntBASIC20.47■□□□□ 0.87
Smarcb1Q9Z0H3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Smarcb1Q9Z0H3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcb1Q9Z0H3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Smarcb1Q9Z0H3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcb1Q9Z0H3 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.46■□□□□ 0.87
Smarcb1Q9Z0H3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Smarcb1Q9Z0H3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcb1Q9Z0H3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcb1Q9Z0H3 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.46■□□□□ 0.87
Smarcb1Q9Z0H3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcb1Q9Z0H3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcb1Q9Z0H3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.45■□□□□ 0.87
Smarcb1Q9Z0H3 AA386476-201ENSMUST00000098781 1665 ntBASIC20.45■□□□□ 0.86
Smarcb1Q9Z0H3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcb1Q9Z0H3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcb1Q9Z0H3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcb1Q9Z0H3 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.45■□□□□ 0.86
Smarcb1Q9Z0H3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Smarcb1Q9Z0H3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcb1Q9Z0H3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcb1Q9Z0H3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Smarcb1Q9Z0H3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcb1Q9Z0H3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcb1Q9Z0H3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcb1Q9Z0H3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcb1Q9Z0H3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcb1Q9Z0H3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.44■□□□□ 0.86
Smarcb1Q9Z0H3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms