Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Scn8aQ9WTU3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn8aQ9WTU3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn8aQ9WTU3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn8aQ9WTU3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn8aQ9WTU3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.06■□□□□ 0.8
Scn8aQ9WTU3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn8aQ9WTU3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn8aQ9WTU3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn8aQ9WTU3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn8aQ9WTU3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scn8aQ9WTU3 Gm10033-202ENSMUST00000211874 928 ntBASIC20.06■□□□□ 0.8
Scn8aQ9WTU3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scn8aQ9WTU3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn8aQ9WTU3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn8aQ9WTU3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn8aQ9WTU3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Scn8aQ9WTU3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.05■□□□□ 0.8
Scn8aQ9WTU3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn8aQ9WTU3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn8aQ9WTU3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Scn8aQ9WTU3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn8aQ9WTU3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn8aQ9WTU3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn8aQ9WTU3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn8aQ9WTU3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.04■□□□□ 0.8
Scn8aQ9WTU3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn8aQ9WTU3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.04■□□□□ 0.8
Scn8aQ9WTU3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn8aQ9WTU3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn8aQ9WTU3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn8aQ9WTU3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scn8aQ9WTU3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn8aQ9WTU3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn8aQ9WTU3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scn8aQ9WTU3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.03■□□□□ 0.8
Scn8aQ9WTU3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn8aQ9WTU3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.03■□□□□ 0.8
Scn8aQ9WTU3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scn8aQ9WTU3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.03■□□□□ 0.8
Scn8aQ9WTU3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scn8aQ9WTU3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.03■□□□□ 0.8
Scn8aQ9WTU3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Scn8aQ9WTU3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scn8aQ9WTU3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scn8aQ9WTU3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Scn8aQ9WTU3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Scn8aQ9WTU3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Scn8aQ9WTU3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scn8aQ9WTU3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
Scn8aQ9WTU3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.02■□□□□ 0.8
Scn8aQ9WTU3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scn8aQ9WTU3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scn8aQ9WTU3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scn8aQ9WTU3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scn8aQ9WTU3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Scn8aQ9WTU3 Gm10849-201ENSMUST00000100397 618 ntBASIC20.01■□□□□ 0.79
Scn8aQ9WTU3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn8aQ9WTU3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.01■□□□□ 0.79
Scn8aQ9WTU3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn8aQ9WTU3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Scn8aQ9WTU3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scn8aQ9WTU3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn8aQ9WTU3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Scn8aQ9WTU3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn8aQ9WTU3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn8aQ9WTU3 AA386476-201ENSMUST00000098781 1665 ntBASIC20■□□□□ 0.79
Scn8aQ9WTU3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn8aQ9WTU3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.99■□□□□ 0.79
Scn8aQ9WTU3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.99■□□□□ 0.79
Scn8aQ9WTU3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn8aQ9WTU3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn8aQ9WTU3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Scn8aQ9WTU3 Gm5874-201ENSMUST00000096101 508 ntBASIC19.99■□□□□ 0.79
Scn8aQ9WTU3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scn8aQ9WTU3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn8aQ9WTU3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn8aQ9WTU3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Scn8aQ9WTU3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.99■□□□□ 0.79
Scn8aQ9WTU3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.99■□□□□ 0.79
Scn8aQ9WTU3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn8aQ9WTU3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scn8aQ9WTU3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn8aQ9WTU3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Scn8aQ9WTU3 Gm8495-201ENSMUST00000188740 694 ntBASIC19.97■□□□□ 0.79
Scn8aQ9WTU3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scn8aQ9WTU3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn8aQ9WTU3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.97■□□□□ 0.79
Scn8aQ9WTU3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn8aQ9WTU3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn8aQ9WTU3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn8aQ9WTU3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn8aQ9WTU3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.97■□□□□ 0.79
Scn8aQ9WTU3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scn8aQ9WTU3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Scn8aQ9WTU3 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.97■□□□□ 0.79
Scn8aQ9WTU3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn8aQ9WTU3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn8aQ9WTU3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn8aQ9WTU3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms