Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nubp1Q9R060 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nubp1Q9R060 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nubp1Q9R060 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.16■□□□□ 0.34
Nubp1Q9R060 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nubp1Q9R060 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nubp1Q9R060 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.16■□□□□ 0.34
Nubp1Q9R060 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nubp1Q9R060 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Nubp1Q9R060 Gm10653-202ENSMUST00000139570 835 ntBASIC17.16■□□□□ 0.34
Nubp1Q9R060 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nubp1Q9R060 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Nubp1Q9R060 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nubp1Q9R060 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nubp1Q9R060 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nubp1Q9R060 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Nubp1Q9R060 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nubp1Q9R060 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.15■□□□□ 0.34
Nubp1Q9R060 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.15■□□□□ 0.34
Nubp1Q9R060 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nubp1Q9R060 Gm4968-201ENSMUST00000071458 858 ntBASIC17.15■□□□□ 0.34
Nubp1Q9R060 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Nubp1Q9R060 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nubp1Q9R060 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.15■□□□□ 0.34
Nubp1Q9R060 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Nubp1Q9R060 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nubp1Q9R060 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nubp1Q9R060 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Nubp1Q9R060 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Nubp1Q9R060 Gm11434-201ENSMUST00000122379 629 ntBASIC17.14■□□□□ 0.33
Nubp1Q9R060 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.14■□□□□ 0.33
Nubp1Q9R060 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nubp1Q9R060 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nubp1Q9R060 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Nubp1Q9R060 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nubp1Q9R060 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nubp1Q9R060 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nubp1Q9R060 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Nubp1Q9R060 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nubp1Q9R060 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nubp1Q9R060 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nubp1Q9R060 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nubp1Q9R060 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nubp1Q9R060 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nubp1Q9R060 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nubp1Q9R060 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nubp1Q9R060 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nubp1Q9R060 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nubp1Q9R060 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nubp1Q9R060 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nubp1Q9R060 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Nubp1Q9R060 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nubp1Q9R060 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nubp1Q9R060 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nubp1Q9R060 Gm7514-201ENSMUST00000209475 934 ntBASIC17.12■□□□□ 0.33
Nubp1Q9R060 Gm10252-201ENSMUST00000209541 832 ntBASIC17.12■□□□□ 0.33
Nubp1Q9R060 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nubp1Q9R060 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.12■□□□□ 0.33
Nubp1Q9R060 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nubp1Q9R060 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nubp1Q9R060 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nubp1Q9R060 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nubp1Q9R060 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nubp1Q9R060 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nubp1Q9R060 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nubp1Q9R060 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nubp1Q9R060 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nubp1Q9R060 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nubp1Q9R060 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nubp1Q9R060 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nubp1Q9R060 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Nubp1Q9R060 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nubp1Q9R060 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nubp1Q9R060 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nubp1Q9R060 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nubp1Q9R060 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nubp1Q9R060 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
Nubp1Q9R060 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nubp1Q9R060 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nubp1Q9R060 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nubp1Q9R060 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nubp1Q9R060 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nubp1Q9R060 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nubp1Q9R060 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nubp1Q9R060 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nubp1Q9R060 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nubp1Q9R060 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nubp1Q9R060 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nubp1Q9R060 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nubp1Q9R060 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nubp1Q9R060 Gm13323-201ENSMUST00000120245 1151 ntBASIC17.09■□□□□ 0.33
Nubp1Q9R060 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nubp1Q9R060 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nubp1Q9R060 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nubp1Q9R060 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nubp1Q9R060 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Nubp1Q9R060 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Nubp1Q9R060 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nubp1Q9R060 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nubp1Q9R060 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms