Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.87■□□□□ 0.77
Shroom3Q9QXN0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shroom3Q9QXN0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Shroom3Q9QXN0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shroom3Q9QXN0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Shroom3Q9QXN0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shroom3Q9QXN0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shroom3Q9QXN0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shroom3Q9QXN0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.86■□□□□ 0.77
Shroom3Q9QXN0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shroom3Q9QXN0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shroom3Q9QXN0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.85■□□□□ 0.77
Shroom3Q9QXN0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shroom3Q9QXN0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shroom3Q9QXN0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shroom3Q9QXN0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Shroom3Q9QXN0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.84■□□□□ 0.77
Shroom3Q9QXN0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Shroom3Q9QXN0 Gm8493-201ENSMUST00000196881 489 ntBASIC19.84■□□□□ 0.77
Shroom3Q9QXN0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shroom3Q9QXN0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Shroom3Q9QXN0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Shroom3Q9QXN0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.84■□□□□ 0.77
Shroom3Q9QXN0 Spcs1-204ENSMUST00000226782 949 ntBASIC19.84■□□□□ 0.77
Shroom3Q9QXN0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shroom3Q9QXN0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.84■□□□□ 0.77
Shroom3Q9QXN0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shroom3Q9QXN0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Shroom3Q9QXN0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shroom3Q9QXN0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shroom3Q9QXN0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Shroom3Q9QXN0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shroom3Q9QXN0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shroom3Q9QXN0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Shroom3Q9QXN0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shroom3Q9QXN0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shroom3Q9QXN0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shroom3Q9QXN0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Shroom3Q9QXN0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Shroom3Q9QXN0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.83■□□□□ 0.76
Shroom3Q9QXN0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Shroom3Q9QXN0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Shroom3Q9QXN0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Shroom3Q9QXN0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shroom3Q9QXN0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shroom3Q9QXN0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shroom3Q9QXN0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shroom3Q9QXN0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Shroom3Q9QXN0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Shroom3Q9QXN0 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.82■□□□□ 0.76
Shroom3Q9QXN0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Shroom3Q9QXN0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Shroom3Q9QXN0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shroom3Q9QXN0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
Shroom3Q9QXN0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shroom3Q9QXN0 Gm5874-201ENSMUST00000096101 508 ntBASIC19.81■□□□□ 0.76
Shroom3Q9QXN0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.81■□□□□ 0.76
Shroom3Q9QXN0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shroom3Q9QXN0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Shroom3Q9QXN0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shroom3Q9QXN0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Shroom3Q9QXN0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Shroom3Q9QXN0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Shroom3Q9QXN0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Shroom3Q9QXN0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.8■□□□□ 0.76
Shroom3Q9QXN0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Shroom3Q9QXN0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Shroom3Q9QXN0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.8■□□□□ 0.76
Shroom3Q9QXN0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shroom3Q9QXN0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shroom3Q9QXN0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
Shroom3Q9QXN0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.79■□□□□ 0.76
Shroom3Q9QXN0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shroom3Q9QXN0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.79■□□□□ 0.76
Shroom3Q9QXN0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shroom3Q9QXN0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shroom3Q9QXN0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shroom3Q9QXN0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.79■□□□□ 0.76
Shroom3Q9QXN0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shroom3Q9QXN0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shroom3Q9QXN0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shroom3Q9QXN0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.78■□□□□ 0.76
Shroom3Q9QXN0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.78■□□□□ 0.76
Shroom3Q9QXN0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Shroom3Q9QXN0 Gm10493-201ENSMUST00000097270 612 ntBASIC19.78■□□□□ 0.76
Shroom3Q9QXN0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Shroom3Q9QXN0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Shroom3Q9QXN0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Shroom3Q9QXN0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shroom3Q9QXN0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shroom3Q9QXN0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shroom3Q9QXN0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.77■□□□□ 0.76
Shroom3Q9QXN0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shroom3Q9QXN0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Shroom3Q9QXN0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shroom3Q9QXN0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shroom3Q9QXN0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shroom3Q9QXN0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shroom3Q9QXN0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Shroom3Q9QXN0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms