Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Msh5Q9QUM7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Msh5Q9QUM7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Msh5Q9QUM7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.01■□□□□ 0.79
Msh5Q9QUM7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msh5Q9QUM7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msh5Q9QUM7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Msh5Q9QUM7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msh5Q9QUM7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20■□□□□ 0.79
Msh5Q9QUM7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Msh5Q9QUM7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Msh5Q9QUM7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20■□□□□ 0.79
Msh5Q9QUM7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20■□□□□ 0.79
Msh5Q9QUM7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Msh5Q9QUM7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Msh5Q9QUM7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Msh5Q9QUM7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Msh5Q9QUM7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Msh5Q9QUM7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh5Q9QUM7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh5Q9QUM7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh5Q9QUM7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.99■□□□□ 0.79
Msh5Q9QUM7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
Msh5Q9QUM7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh5Q9QUM7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh5Q9QUM7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Msh5Q9QUM7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Msh5Q9QUM7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Msh5Q9QUM7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msh5Q9QUM7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh5Q9QUM7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Msh5Q9QUM7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh5Q9QUM7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh5Q9QUM7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Msh5Q9QUM7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Msh5Q9QUM7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msh5Q9QUM7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Msh5Q9QUM7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.98■□□□□ 0.79
Msh5Q9QUM7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msh5Q9QUM7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.97■□□□□ 0.79
Msh5Q9QUM7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msh5Q9QUM7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Msh5Q9QUM7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msh5Q9QUM7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msh5Q9QUM7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msh5Q9QUM7 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.96■□□□□ 0.79
Msh5Q9QUM7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh5Q9QUM7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh5Q9QUM7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Msh5Q9QUM7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Msh5Q9QUM7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Msh5Q9QUM7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh5Q9QUM7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Msh5Q9QUM7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Msh5Q9QUM7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh5Q9QUM7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh5Q9QUM7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
Msh5Q9QUM7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
Msh5Q9QUM7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.94■□□□□ 0.78
Msh5Q9QUM7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Msh5Q9QUM7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Msh5Q9QUM7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Msh5Q9QUM7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.94■□□□□ 0.78
Msh5Q9QUM7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Msh5Q9QUM7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Msh5Q9QUM7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Msh5Q9QUM7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Msh5Q9QUM7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh5Q9QUM7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh5Q9QUM7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh5Q9QUM7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Msh5Q9QUM7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.93■□□□□ 0.78
Msh5Q9QUM7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.93■□□□□ 0.78
Msh5Q9QUM7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh5Q9QUM7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh5Q9QUM7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh5Q9QUM7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Msh5Q9QUM7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh5Q9QUM7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh5Q9QUM7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh5Q9QUM7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Msh5Q9QUM7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Msh5Q9QUM7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Msh5Q9QUM7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Msh5Q9QUM7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Msh5Q9QUM7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Msh5Q9QUM7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh5Q9QUM7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Msh5Q9QUM7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Msh5Q9QUM7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh5Q9QUM7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh5Q9QUM7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.91■□□□□ 0.78
Msh5Q9QUM7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh5Q9QUM7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh5Q9QUM7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh5Q9QUM7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.9■□□□□ 0.78
Msh5Q9QUM7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.9■□□□□ 0.78
Msh5Q9QUM7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Msh5Q9QUM7 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.9■□□□□ 0.78
Msh5Q9QUM7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms