Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim39Q9ESN2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trim39Q9ESN2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim39Q9ESN2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim39Q9ESN2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim39Q9ESN2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim39Q9ESN2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim39Q9ESN2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim39Q9ESN2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim39Q9ESN2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trim39Q9ESN2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.25■□□□□ 0.51
Trim39Q9ESN2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.25■□□□□ 0.51
Trim39Q9ESN2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.25■□□□□ 0.51
Trim39Q9ESN2 Gm7143-201ENSMUST00000222811 859 ntBASIC18.25■□□□□ 0.51
Trim39Q9ESN2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim39Q9ESN2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.25■□□□□ 0.51
Trim39Q9ESN2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim39Q9ESN2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trim39Q9ESN2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim39Q9ESN2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim39Q9ESN2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trim39Q9ESN2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trim39Q9ESN2 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.24■□□□□ 0.51
Trim39Q9ESN2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim39Q9ESN2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim39Q9ESN2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim39Q9ESN2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim39Q9ESN2 Gm22238-201ENSMUST00000175222 88 ntBASIC18.24■□□□□ 0.51
Trim39Q9ESN2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trim39Q9ESN2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Trim39Q9ESN2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim39Q9ESN2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim39Q9ESN2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim39Q9ESN2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim39Q9ESN2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim39Q9ESN2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim39Q9ESN2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim39Q9ESN2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Trim39Q9ESN2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trim39Q9ESN2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim39Q9ESN2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trim39Q9ESN2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim39Q9ESN2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim39Q9ESN2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim39Q9ESN2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim39Q9ESN2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim39Q9ESN2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim39Q9ESN2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim39Q9ESN2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim39Q9ESN2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim39Q9ESN2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim39Q9ESN2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim39Q9ESN2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.22■□□□□ 0.51
Trim39Q9ESN2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim39Q9ESN2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim39Q9ESN2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim39Q9ESN2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim39Q9ESN2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim39Q9ESN2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim39Q9ESN2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim39Q9ESN2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Trim39Q9ESN2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim39Q9ESN2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trim39Q9ESN2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim39Q9ESN2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim39Q9ESN2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim39Q9ESN2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.2■□□□□ 0.5
Trim39Q9ESN2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Trim39Q9ESN2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim39Q9ESN2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim39Q9ESN2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim39Q9ESN2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim39Q9ESN2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim39Q9ESN2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim39Q9ESN2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim39Q9ESN2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim39Q9ESN2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trim39Q9ESN2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim39Q9ESN2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim39Q9ESN2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim39Q9ESN2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim39Q9ESN2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim39Q9ESN2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.19■□□□□ 0.5
Trim39Q9ESN2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim39Q9ESN2 Gm9870-201ENSMUST00000063874 645 ntBASIC18.19■□□□□ 0.5
Trim39Q9ESN2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.19■□□□□ 0.5
Trim39Q9ESN2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim39Q9ESN2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trim39Q9ESN2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim39Q9ESN2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim39Q9ESN2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim39Q9ESN2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim39Q9ESN2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim39Q9ESN2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim39Q9ESN2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim39Q9ESN2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim39Q9ESN2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim39Q9ESN2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
Trim39Q9ESN2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim39Q9ESN2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms