Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gtf3c6Q9D8P7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gtf3c6Q9D8P7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gtf3c6Q9D8P7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gtf3c6Q9D8P7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.04■□□□□ 0.96
Gtf3c6Q9D8P7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gtf3c6Q9D8P7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.03■□□□□ 0.96
Gtf3c6Q9D8P7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gtf3c6Q9D8P7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gtf3c6Q9D8P7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.03■□□□□ 0.96
Gtf3c6Q9D8P7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.03■□□□□ 0.96
Gtf3c6Q9D8P7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gtf3c6Q9D8P7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gtf3c6Q9D8P7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Gtf3c6Q9D8P7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gtf3c6Q9D8P7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gtf3c6Q9D8P7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gtf3c6Q9D8P7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Gtf3c6Q9D8P7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gtf3c6Q9D8P7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gtf3c6Q9D8P7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Gtf3c6Q9D8P7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Gtf3c6Q9D8P7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Gtf3c6Q9D8P7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.02■□□□□ 0.95
Gtf3c6Q9D8P7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gtf3c6Q9D8P7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Gtf3c6Q9D8P7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gtf3c6Q9D8P7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Gtf3c6Q9D8P7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gtf3c6Q9D8P7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.01■□□□□ 0.95
Gtf3c6Q9D8P7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gtf3c6Q9D8P7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21■□□□□ 0.95
Gtf3c6Q9D8P7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21■□□□□ 0.95
Gtf3c6Q9D8P7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21■□□□□ 0.95
Gtf3c6Q9D8P7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Gtf3c6Q9D8P7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Gtf3c6Q9D8P7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Gtf3c6Q9D8P7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gtf3c6Q9D8P7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gtf3c6Q9D8P7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gtf3c6Q9D8P7 Gm9847-201ENSMUST00000052528 599 ntBASIC20.99■□□□□ 0.95
Gtf3c6Q9D8P7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Gtf3c6Q9D8P7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gtf3c6Q9D8P7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gtf3c6Q9D8P7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Gtf3c6Q9D8P7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gtf3c6Q9D8P7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gtf3c6Q9D8P7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Gtf3c6Q9D8P7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.98■□□□□ 0.95
Gtf3c6Q9D8P7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.98■□□□□ 0.95
Gtf3c6Q9D8P7 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.98■□□□□ 0.95
Gtf3c6Q9D8P7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gtf3c6Q9D8P7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gtf3c6Q9D8P7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gtf3c6Q9D8P7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Gtf3c6Q9D8P7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gtf3c6Q9D8P7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gtf3c6Q9D8P7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Gtf3c6Q9D8P7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gtf3c6Q9D8P7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gtf3c6Q9D8P7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gtf3c6Q9D8P7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.97■□□□□ 0.95
Gtf3c6Q9D8P7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gtf3c6Q9D8P7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gtf3c6Q9D8P7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.97■□□□□ 0.95
Gtf3c6Q9D8P7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.97■□□□□ 0.95
Gtf3c6Q9D8P7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gtf3c6Q9D8P7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gtf3c6Q9D8P7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Gtf3c6Q9D8P7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gtf3c6Q9D8P7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gtf3c6Q9D8P7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gtf3c6Q9D8P7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gtf3c6Q9D8P7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.96■□□□□ 0.95
Gtf3c6Q9D8P7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gtf3c6Q9D8P7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gtf3c6Q9D8P7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gtf3c6Q9D8P7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gtf3c6Q9D8P7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gtf3c6Q9D8P7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gtf3c6Q9D8P7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Gtf3c6Q9D8P7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gtf3c6Q9D8P7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gtf3c6Q9D8P7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Gtf3c6Q9D8P7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.95■□□□□ 0.94
Gtf3c6Q9D8P7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gtf3c6Q9D8P7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gtf3c6Q9D8P7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gtf3c6Q9D8P7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
Gtf3c6Q9D8P7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gtf3c6Q9D8P7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gtf3c6Q9D8P7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.95■□□□□ 0.94
Gtf3c6Q9D8P7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gtf3c6Q9D8P7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.95■□□□□ 0.94
Gtf3c6Q9D8P7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gtf3c6Q9D8P7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.95■□□□□ 0.94
Gtf3c6Q9D8P7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gtf3c6Q9D8P7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.95■□□□□ 0.94
Gtf3c6Q9D8P7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gtf3c6Q9D8P7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms