Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf225Q9D7D1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf225Q9D7D1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf225Q9D7D1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf225Q9D7D1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf225Q9D7D1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf225Q9D7D1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf225Q9D7D1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf225Q9D7D1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf225Q9D7D1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf225Q9D7D1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf225Q9D7D1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.72■□□□□ 0.91
Rnf225Q9D7D1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Rnf225Q9D7D1 Iqck-206ENSMUST00000208658 2891 ntBASIC20.72■□□□□ 0.91
Rnf225Q9D7D1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf225Q9D7D1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Rnf225Q9D7D1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.71■□□□□ 0.91
Rnf225Q9D7D1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf225Q9D7D1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf225Q9D7D1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf225Q9D7D1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf225Q9D7D1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf225Q9D7D1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf225Q9D7D1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf225Q9D7D1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.71■□□□□ 0.91
Rnf225Q9D7D1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf225Q9D7D1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf225Q9D7D1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf225Q9D7D1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.7■□□□□ 0.9
Rnf225Q9D7D1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf225Q9D7D1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf225Q9D7D1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Rnf225Q9D7D1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf225Q9D7D1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf225Q9D7D1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rnf225Q9D7D1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf225Q9D7D1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf225Q9D7D1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf225Q9D7D1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf225Q9D7D1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.69■□□□□ 0.9
Rnf225Q9D7D1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf225Q9D7D1 Gm43416-201ENSMUST00000201916 1015 ntBASIC20.69■□□□□ 0.9
Rnf225Q9D7D1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf225Q9D7D1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf225Q9D7D1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf225Q9D7D1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf225Q9D7D1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf225Q9D7D1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf225Q9D7D1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf225Q9D7D1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf225Q9D7D1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf225Q9D7D1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.68■□□□□ 0.9
Rnf225Q9D7D1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf225Q9D7D1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.68■□□□□ 0.9
Rnf225Q9D7D1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf225Q9D7D1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf225Q9D7D1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Rnf225Q9D7D1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf225Q9D7D1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.67■□□□□ 0.9
Rnf225Q9D7D1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf225Q9D7D1 AA386476-201ENSMUST00000098781 1665 ntBASIC20.67■□□□□ 0.9
Rnf225Q9D7D1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rnf225Q9D7D1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf225Q9D7D1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf225Q9D7D1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Rnf225Q9D7D1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf225Q9D7D1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf225Q9D7D1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.67■□□□□ 0.9
Rnf225Q9D7D1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf225Q9D7D1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.67■□□□□ 0.9
Rnf225Q9D7D1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf225Q9D7D1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf225Q9D7D1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf225Q9D7D1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf225Q9D7D1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.66■□□□□ 0.9
Rnf225Q9D7D1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf225Q9D7D1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf225Q9D7D1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf225Q9D7D1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf225Q9D7D1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf225Q9D7D1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.65■□□□□ 0.9
Rnf225Q9D7D1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf225Q9D7D1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf225Q9D7D1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf225Q9D7D1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf225Q9D7D1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.65■□□□□ 0.9
Rnf225Q9D7D1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf225Q9D7D1 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.65■□□□□ 0.9
Rnf225Q9D7D1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf225Q9D7D1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf225Q9D7D1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf225Q9D7D1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf225Q9D7D1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf225Q9D7D1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Rnf225Q9D7D1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf225Q9D7D1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.64■□□□□ 0.89
Rnf225Q9D7D1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf225Q9D7D1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf225Q9D7D1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
Rnf225Q9D7D1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms