Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
5530400C23RikQ9D3I0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.35■□□□□ 0.69
5530400C23RikQ9D3I0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
5530400C23RikQ9D3I0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
5530400C23RikQ9D3I0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.35■□□□□ 0.69
5530400C23RikQ9D3I0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
5530400C23RikQ9D3I0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
5530400C23RikQ9D3I0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
5530400C23RikQ9D3I0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.34■□□□□ 0.69
5530400C23RikQ9D3I0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
5530400C23RikQ9D3I0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.34■□□□□ 0.69
5530400C23RikQ9D3I0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
5530400C23RikQ9D3I0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.34■□□□□ 0.69
5530400C23RikQ9D3I0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
5530400C23RikQ9D3I0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
5530400C23RikQ9D3I0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
5530400C23RikQ9D3I0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
5530400C23RikQ9D3I0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
5530400C23RikQ9D3I0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
5530400C23RikQ9D3I0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
5530400C23RikQ9D3I0 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.33■□□□□ 0.69
5530400C23RikQ9D3I0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
5530400C23RikQ9D3I0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
5530400C23RikQ9D3I0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.68
5530400C23RikQ9D3I0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
5530400C23RikQ9D3I0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
5530400C23RikQ9D3I0 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.33■□□□□ 0.68
5530400C23RikQ9D3I0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
5530400C23RikQ9D3I0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
5530400C23RikQ9D3I0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
5530400C23RikQ9D3I0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
5530400C23RikQ9D3I0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
5530400C23RikQ9D3I0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
5530400C23RikQ9D3I0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
5530400C23RikQ9D3I0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
5530400C23RikQ9D3I0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
5530400C23RikQ9D3I0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
5530400C23RikQ9D3I0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
5530400C23RikQ9D3I0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
5530400C23RikQ9D3I0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
5530400C23RikQ9D3I0 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.31■□□□□ 0.68
5530400C23RikQ9D3I0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
5530400C23RikQ9D3I0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
5530400C23RikQ9D3I0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
5530400C23RikQ9D3I0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
5530400C23RikQ9D3I0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
5530400C23RikQ9D3I0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
5530400C23RikQ9D3I0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
5530400C23RikQ9D3I0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
5530400C23RikQ9D3I0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.3■□□□□ 0.68
5530400C23RikQ9D3I0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
5530400C23RikQ9D3I0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
5530400C23RikQ9D3I0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
5530400C23RikQ9D3I0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.3■□□□□ 0.68
5530400C23RikQ9D3I0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
5530400C23RikQ9D3I0 Gm43137-201ENSMUST00000198052 594 ntBASIC19.3■□□□□ 0.68
5530400C23RikQ9D3I0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
5530400C23RikQ9D3I0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
5530400C23RikQ9D3I0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
5530400C23RikQ9D3I0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
5530400C23RikQ9D3I0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
5530400C23RikQ9D3I0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
5530400C23RikQ9D3I0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
5530400C23RikQ9D3I0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
5530400C23RikQ9D3I0 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.29■□□□□ 0.68
5530400C23RikQ9D3I0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
5530400C23RikQ9D3I0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
5530400C23RikQ9D3I0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
5530400C23RikQ9D3I0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
5530400C23RikQ9D3I0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
5530400C23RikQ9D3I0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
5530400C23RikQ9D3I0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
5530400C23RikQ9D3I0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.29■□□□□ 0.68
5530400C23RikQ9D3I0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
5530400C23RikQ9D3I0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
5530400C23RikQ9D3I0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
5530400C23RikQ9D3I0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
5530400C23RikQ9D3I0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
5530400C23RikQ9D3I0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
5530400C23RikQ9D3I0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
5530400C23RikQ9D3I0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.28■□□□□ 0.68
5530400C23RikQ9D3I0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.28■□□□□ 0.68
5530400C23RikQ9D3I0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
5530400C23RikQ9D3I0 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.28■□□□□ 0.68
5530400C23RikQ9D3I0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
5530400C23RikQ9D3I0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
5530400C23RikQ9D3I0 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.28■□□□□ 0.68
5530400C23RikQ9D3I0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
5530400C23RikQ9D3I0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
5530400C23RikQ9D3I0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.27■□□□□ 0.68
5530400C23RikQ9D3I0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
5530400C23RikQ9D3I0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
5530400C23RikQ9D3I0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
5530400C23RikQ9D3I0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.27■□□□□ 0.68
5530400C23RikQ9D3I0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
5530400C23RikQ9D3I0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
5530400C23RikQ9D3I0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
5530400C23RikQ9D3I0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
5530400C23RikQ9D3I0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
5530400C23RikQ9D3I0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms