Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shmt2Q9CZN7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.8■□□□□ 0.6
Shmt2Q9CZN7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.8■□□□□ 0.6
Shmt2Q9CZN7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Shmt2Q9CZN7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shmt2Q9CZN7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shmt2Q9CZN7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shmt2Q9CZN7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shmt2Q9CZN7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shmt2Q9CZN7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shmt2Q9CZN7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shmt2Q9CZN7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.79■□□□□ 0.6
Shmt2Q9CZN7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.79■□□□□ 0.6
Shmt2Q9CZN7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shmt2Q9CZN7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shmt2Q9CZN7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shmt2Q9CZN7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shmt2Q9CZN7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shmt2Q9CZN7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Shmt2Q9CZN7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.78■□□□□ 0.6
Shmt2Q9CZN7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shmt2Q9CZN7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shmt2Q9CZN7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shmt2Q9CZN7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shmt2Q9CZN7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shmt2Q9CZN7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Shmt2Q9CZN7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.78■□□□□ 0.6
Shmt2Q9CZN7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shmt2Q9CZN7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shmt2Q9CZN7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Shmt2Q9CZN7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.77■□□□□ 0.6
Shmt2Q9CZN7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shmt2Q9CZN7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
Shmt2Q9CZN7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Shmt2Q9CZN7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Shmt2Q9CZN7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shmt2Q9CZN7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shmt2Q9CZN7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.77■□□□□ 0.6
Shmt2Q9CZN7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Shmt2Q9CZN7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Shmt2Q9CZN7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Shmt2Q9CZN7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Shmt2Q9CZN7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.76■□□□□ 0.59
Shmt2Q9CZN7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shmt2Q9CZN7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Shmt2Q9CZN7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.76■□□□□ 0.59
Shmt2Q9CZN7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Shmt2Q9CZN7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Shmt2Q9CZN7 Golgb1-201ENSMUST00000023534 498 ntBASIC18.76■□□□□ 0.59
Shmt2Q9CZN7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Shmt2Q9CZN7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shmt2Q9CZN7 Gm13241-201ENSMUST00000094493 780 ntBASIC18.76■□□□□ 0.59
Shmt2Q9CZN7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Shmt2Q9CZN7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Shmt2Q9CZN7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Shmt2Q9CZN7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shmt2Q9CZN7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Shmt2Q9CZN7 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.75■□□□□ 0.59
Shmt2Q9CZN7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shmt2Q9CZN7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Shmt2Q9CZN7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Shmt2Q9CZN7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shmt2Q9CZN7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shmt2Q9CZN7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shmt2Q9CZN7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shmt2Q9CZN7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Shmt2Q9CZN7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shmt2Q9CZN7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shmt2Q9CZN7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shmt2Q9CZN7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shmt2Q9CZN7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.74■□□□□ 0.59
Shmt2Q9CZN7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.74■□□□□ 0.59
Shmt2Q9CZN7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.74■□□□□ 0.59
Shmt2Q9CZN7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shmt2Q9CZN7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shmt2Q9CZN7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Shmt2Q9CZN7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shmt2Q9CZN7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shmt2Q9CZN7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Shmt2Q9CZN7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shmt2Q9CZN7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shmt2Q9CZN7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shmt2Q9CZN7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shmt2Q9CZN7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.73■□□□□ 0.59
Shmt2Q9CZN7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shmt2Q9CZN7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.73■□□□□ 0.59
Shmt2Q9CZN7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shmt2Q9CZN7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shmt2Q9CZN7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shmt2Q9CZN7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shmt2Q9CZN7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Shmt2Q9CZN7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shmt2Q9CZN7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Shmt2Q9CZN7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shmt2Q9CZN7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shmt2Q9CZN7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shmt2Q9CZN7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shmt2Q9CZN7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shmt2Q9CZN7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.71■□□□□ 0.59
Shmt2Q9CZN7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms