Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Khdc3Q9CWU5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Khdc3Q9CWU5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Khdc3Q9CWU5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.89■□□□□ 0.61
Khdc3Q9CWU5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Khdc3Q9CWU5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Khdc3Q9CWU5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Khdc3Q9CWU5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Khdc3Q9CWU5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Khdc3Q9CWU5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Khdc3Q9CWU5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Khdc3Q9CWU5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Khdc3Q9CWU5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Khdc3Q9CWU5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.88■□□□□ 0.61
Khdc3Q9CWU5 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Khdc3Q9CWU5 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Khdc3Q9CWU5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Khdc3Q9CWU5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Khdc3Q9CWU5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Khdc3Q9CWU5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Khdc3Q9CWU5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Khdc3Q9CWU5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Khdc3Q9CWU5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Khdc3Q9CWU5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Khdc3Q9CWU5 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Khdc3Q9CWU5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Khdc3Q9CWU5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Khdc3Q9CWU5 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.87■□□□□ 0.61
Khdc3Q9CWU5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Khdc3Q9CWU5 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Khdc3Q9CWU5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Khdc3Q9CWU5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc3Q9CWU5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc3Q9CWU5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc3Q9CWU5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc3Q9CWU5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.86■□□□□ 0.61
Khdc3Q9CWU5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc3Q9CWU5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Khdc3Q9CWU5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Khdc3Q9CWU5 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Khdc3Q9CWU5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc3Q9CWU5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc3Q9CWU5 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc3Q9CWU5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Khdc3Q9CWU5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Khdc3Q9CWU5 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Khdc3Q9CWU5 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.85■□□□□ 0.61
Khdc3Q9CWU5 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Khdc3Q9CWU5 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Khdc3Q9CWU5 Gm9847-201ENSMUST00000052528 599 ntBASIC18.85■□□□□ 0.61
Khdc3Q9CWU5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Khdc3Q9CWU5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Khdc3Q9CWU5 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.85■□□□□ 0.61
Khdc3Q9CWU5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Khdc3Q9CWU5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Khdc3Q9CWU5 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Khdc3Q9CWU5 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Khdc3Q9CWU5 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Khdc3Q9CWU5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Khdc3Q9CWU5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.84■□□□□ 0.61
Khdc3Q9CWU5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Khdc3Q9CWU5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Khdc3Q9CWU5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.84■□□□□ 0.61
Khdc3Q9CWU5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Khdc3Q9CWU5 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Khdc3Q9CWU5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Khdc3Q9CWU5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Khdc3Q9CWU5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Khdc3Q9CWU5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Khdc3Q9CWU5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Khdc3Q9CWU5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Khdc3Q9CWU5 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Khdc3Q9CWU5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Khdc3Q9CWU5 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Khdc3Q9CWU5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Khdc3Q9CWU5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Khdc3Q9CWU5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Khdc3Q9CWU5 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Khdc3Q9CWU5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Khdc3Q9CWU5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Khdc3Q9CWU5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Khdc3Q9CWU5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Khdc3Q9CWU5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Khdc3Q9CWU5 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.82■□□□□ 0.6
Khdc3Q9CWU5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Khdc3Q9CWU5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Khdc3Q9CWU5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Khdc3Q9CWU5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Khdc3Q9CWU5 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.82■□□□□ 0.6
Khdc3Q9CWU5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Khdc3Q9CWU5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Khdc3Q9CWU5 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Khdc3Q9CWU5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Khdc3Q9CWU5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Khdc3Q9CWU5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Khdc3Q9CWU5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Khdc3Q9CWU5 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.81■□□□□ 0.6
Khdc3Q9CWU5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Khdc3Q9CWU5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Khdc3Q9CWU5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms