Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm7Q9CQQ8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm7Q9CQQ8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm7Q9CQQ8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm7Q9CQQ8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm7Q9CQQ8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm7Q9CQQ8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm7Q9CQQ8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.95■□□□□ 0.78
Lsm7Q9CQQ8 Gm10493-201ENSMUST00000097270 612 ntBASIC19.95■□□□□ 0.78
Lsm7Q9CQQ8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm7Q9CQQ8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.95■□□□□ 0.78
Lsm7Q9CQQ8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm7Q9CQQ8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.95■□□□□ 0.78
Lsm7Q9CQQ8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm7Q9CQQ8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm7Q9CQQ8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm7Q9CQQ8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm7Q9CQQ8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Lsm7Q9CQQ8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm7Q9CQQ8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm7Q9CQQ8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm7Q9CQQ8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm7Q9CQQ8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm7Q9CQQ8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm7Q9CQQ8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Lsm7Q9CQQ8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm7Q9CQQ8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Lsm7Q9CQQ8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm7Q9CQQ8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm7Q9CQQ8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm7Q9CQQ8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm7Q9CQQ8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm7Q9CQQ8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.93■□□□□ 0.78
Lsm7Q9CQQ8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm7Q9CQQ8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm7Q9CQQ8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm7Q9CQQ8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Lsm7Q9CQQ8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm7Q9CQQ8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm7Q9CQQ8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.92■□□□□ 0.78
Lsm7Q9CQQ8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm7Q9CQQ8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm7Q9CQQ8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm7Q9CQQ8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Lsm7Q9CQQ8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm7Q9CQQ8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm7Q9CQQ8 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.91■□□□□ 0.78
Lsm7Q9CQQ8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Lsm7Q9CQQ8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm7Q9CQQ8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm7Q9CQQ8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm7Q9CQQ8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm7Q9CQQ8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm7Q9CQQ8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Lsm7Q9CQQ8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm7Q9CQQ8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm7Q9CQQ8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm7Q9CQQ8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.9■□□□□ 0.78
Lsm7Q9CQQ8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm7Q9CQQ8 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.9■□□□□ 0.78
Lsm7Q9CQQ8 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.9■□□□□ 0.78
Lsm7Q9CQQ8 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.9■□□□□ 0.78
Lsm7Q9CQQ8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.9■□□□□ 0.78
Lsm7Q9CQQ8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm7Q9CQQ8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm7Q9CQQ8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm7Q9CQQ8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm7Q9CQQ8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Lsm7Q9CQQ8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm7Q9CQQ8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.9■□□□□ 0.78
Lsm7Q9CQQ8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lsm7Q9CQQ8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lsm7Q9CQQ8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Lsm7Q9CQQ8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lsm7Q9CQQ8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lsm7Q9CQQ8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Lsm7Q9CQQ8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
Lsm7Q9CQQ8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lsm7Q9CQQ8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm7Q9CQQ8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Lsm7Q9CQQ8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.88■□□□□ 0.77
Lsm7Q9CQQ8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm7Q9CQQ8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm7Q9CQQ8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm7Q9CQQ8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm7Q9CQQ8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm7Q9CQQ8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm7Q9CQQ8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm7Q9CQQ8 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.87■□□□□ 0.77
Lsm7Q9CQQ8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm7Q9CQQ8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.87■□□□□ 0.77
Lsm7Q9CQQ8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.87■□□□□ 0.77
Lsm7Q9CQQ8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm7Q9CQQ8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms