Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1Q9CQ70 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1Q9CQ70 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.13■□□□□ 0.17
H2afb1Q9CQ70 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.13■□□□□ 0.17
H2afb1Q9CQ70 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1Q9CQ70 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1Q9CQ70 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
H2afb1Q9CQ70 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.13■□□□□ 0.17
H2afb1Q9CQ70 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb1Q9CQ70 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb1Q9CQ70 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb1Q9CQ70 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.12■□□□□ 0.17
H2afb1Q9CQ70 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb1Q9CQ70 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
H2afb1Q9CQ70 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb1Q9CQ70 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb1Q9CQ70 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.12■□□□□ 0.17
H2afb1Q9CQ70 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.12■□□□□ 0.17
H2afb1Q9CQ70 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb1Q9CQ70 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2afb1Q9CQ70 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
H2afb1Q9CQ70 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb1Q9CQ70 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb1Q9CQ70 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb1Q9CQ70 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb1Q9CQ70 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb1Q9CQ70 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb1Q9CQ70 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
H2afb1Q9CQ70 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
H2afb1Q9CQ70 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb1Q9CQ70 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb1Q9CQ70 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb1Q9CQ70 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
H2afb1Q9CQ70 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb1Q9CQ70 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.1■□□□□ 0.17
H2afb1Q9CQ70 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb1Q9CQ70 Gm45102-201ENSMUST00000207427 857 ntBASIC16.1■□□□□ 0.17
H2afb1Q9CQ70 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
H2afb1Q9CQ70 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb1Q9CQ70 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afb1Q9CQ70 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
H2afb1Q9CQ70 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
H2afb1Q9CQ70 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.09■□□□□ 0.17
H2afb1Q9CQ70 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.09■□□□□ 0.17
H2afb1Q9CQ70 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb1Q9CQ70 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb1Q9CQ70 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb1Q9CQ70 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb1Q9CQ70 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb1Q9CQ70 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb1Q9CQ70 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb1Q9CQ70 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
H2afb1Q9CQ70 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
H2afb1Q9CQ70 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.09■□□□□ 0.17
H2afb1Q9CQ70 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb1Q9CQ70 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb1Q9CQ70 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
H2afb1Q9CQ70 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
H2afb1Q9CQ70 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.08■□□□□ 0.17
H2afb1Q9CQ70 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
H2afb1Q9CQ70 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb1Q9CQ70 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
H2afb1Q9CQ70 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb1Q9CQ70 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb1Q9CQ70 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb1Q9CQ70 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb1Q9CQ70 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.08■□□□□ 0.16
H2afb1Q9CQ70 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.08■□□□□ 0.16
H2afb1Q9CQ70 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb1Q9CQ70 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.08■□□□□ 0.16
H2afb1Q9CQ70 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb1Q9CQ70 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb1Q9CQ70 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb1Q9CQ70 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb1Q9CQ70 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb1Q9CQ70 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.07■□□□□ 0.16
H2afb1Q9CQ70 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb1Q9CQ70 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.07■□□□□ 0.16
H2afb1Q9CQ70 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb1Q9CQ70 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb1Q9CQ70 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb1Q9CQ70 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
H2afb1Q9CQ70 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.07■□□□□ 0.16
H2afb1Q9CQ70 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb1Q9CQ70 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb1Q9CQ70 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb1Q9CQ70 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
H2afb1Q9CQ70 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb1Q9CQ70 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.06■□□□□ 0.16
H2afb1Q9CQ70 Rps24-207ENSMUST00000224568 714 ntBASIC16.06■□□□□ 0.16
H2afb1Q9CQ70 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb1Q9CQ70 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
H2afb1Q9CQ70 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
H2afb1Q9CQ70 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb1Q9CQ70 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb1Q9CQ70 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb1Q9CQ70 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb1Q9CQ70 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb1Q9CQ70 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.05■□□□□ 0.16
H2afb1Q9CQ70 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms