Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm9847-201ENSMUST00000052528 599 ntBASIC19.17■□□□□ 0.66
Trim16Q99PP9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim16Q99PP9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim16Q99PP9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim16Q99PP9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim16Q99PP9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim16Q99PP9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
Trim16Q99PP9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.16■□□□□ 0.66
Trim16Q99PP9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim16Q99PP9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.16■□□□□ 0.66
Trim16Q99PP9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim16Q99PP9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim16Q99PP9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim16Q99PP9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim16Q99PP9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Trim16Q99PP9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trim16Q99PP9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim16Q99PP9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim16Q99PP9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim16Q99PP9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim16Q99PP9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Trim16Q99PP9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim16Q99PP9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim16Q99PP9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim16Q99PP9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.15■□□□□ 0.66
Trim16Q99PP9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim16Q99PP9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim16Q99PP9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim16Q99PP9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim16Q99PP9 Golph3-202ENSMUST00000226517 2359 ntBASIC19.15■□□□□ 0.66
Trim16Q99PP9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.15■□□□□ 0.66
Trim16Q99PP9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim16Q99PP9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Trim16Q99PP9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim16Q99PP9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.15■□□□□ 0.66
Trim16Q99PP9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim16Q99PP9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim16Q99PP9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim16Q99PP9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim16Q99PP9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim16Q99PP9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim16Q99PP9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim16Q99PP9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim16Q99PP9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim16Q99PP9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim16Q99PP9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trim16Q99PP9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim16Q99PP9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Trim16Q99PP9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim16Q99PP9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim16Q99PP9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim16Q99PP9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Trim16Q99PP9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim16Q99PP9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim16Q99PP9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim16Q99PP9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim16Q99PP9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim16Q99PP9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim16Q99PP9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.12■□□□□ 0.65
Trim16Q99PP9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trim16Q99PP9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim16Q99PP9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim16Q99PP9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trim16Q99PP9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim16Q99PP9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim16Q99PP9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim16Q99PP9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim16Q99PP9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim16Q99PP9 Gm43530-201ENSMUST00000195920 274 ntBASIC19.11■□□□□ 0.65
Trim16Q99PP9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim16Q99PP9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim16Q99PP9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim16Q99PP9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trim16Q99PP9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim16Q99PP9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim16Q99PP9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim16Q99PP9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim16Q99PP9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim16Q99PP9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim16Q99PP9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim16Q99PP9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Trim16Q99PP9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.1■□□□□ 0.65
Trim16Q99PP9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim16Q99PP9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim16Q99PP9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim16Q99PP9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim16Q99PP9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim16Q99PP9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim16Q99PP9 Gm21956-201ENSMUST00000179946 522 ntBASIC19.09■□□□□ 0.65
Trim16Q99PP9 Gm13241-201ENSMUST00000094493 780 ntBASIC19.09■□□□□ 0.65
Trim16Q99PP9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim16Q99PP9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim16Q99PP9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim16Q99PP9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim16Q99PP9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim16Q99PP9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Trim16Q99PP9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Trim16Q99PP9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim16Q99PP9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim16Q99PP9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms