Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm15546-201ENSMUST00000122095 826 ntBASIC19.27■□□□□ 0.68
Trim8Q99PJ2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim8Q99PJ2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim8Q99PJ2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim8Q99PJ2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trim8Q99PJ2 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.26■□□□□ 0.67
Trim8Q99PJ2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim8Q99PJ2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim8Q99PJ2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim8Q99PJ2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim8Q99PJ2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim8Q99PJ2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trim8Q99PJ2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trim8Q99PJ2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim8Q99PJ2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.25■□□□□ 0.67
Trim8Q99PJ2 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.25■□□□□ 0.67
Trim8Q99PJ2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim8Q99PJ2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim8Q99PJ2 Gm10232-201ENSMUST00000089221 720 ntBASIC19.25■□□□□ 0.67
Trim8Q99PJ2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim8Q99PJ2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Trim8Q99PJ2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trim8Q99PJ2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.25■□□□□ 0.67
Trim8Q99PJ2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim8Q99PJ2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim8Q99PJ2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim8Q99PJ2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim8Q99PJ2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim8Q99PJ2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim8Q99PJ2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim8Q99PJ2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trim8Q99PJ2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trim8Q99PJ2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim8Q99PJ2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.24■□□□□ 0.67
Trim8Q99PJ2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trim8Q99PJ2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Trim8Q99PJ2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim8Q99PJ2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim8Q99PJ2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim8Q99PJ2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim8Q99PJ2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim8Q99PJ2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim8Q99PJ2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim8Q99PJ2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim8Q99PJ2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trim8Q99PJ2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim8Q99PJ2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim8Q99PJ2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim8Q99PJ2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim8Q99PJ2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim8Q99PJ2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim8Q99PJ2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim8Q99PJ2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim8Q99PJ2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.22■□□□□ 0.67
Trim8Q99PJ2 Gm7143-201ENSMUST00000222811 859 ntBASIC19.22■□□□□ 0.67
Trim8Q99PJ2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim8Q99PJ2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim8Q99PJ2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim8Q99PJ2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim8Q99PJ2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim8Q99PJ2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim8Q99PJ2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim8Q99PJ2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim8Q99PJ2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trim8Q99PJ2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim8Q99PJ2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trim8Q99PJ2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim8Q99PJ2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim8Q99PJ2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim8Q99PJ2 Gm15820-201ENSMUST00000201566 728 ntBASIC19.21■□□□□ 0.67
Trim8Q99PJ2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim8Q99PJ2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim8Q99PJ2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim8Q99PJ2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trim8Q99PJ2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim8Q99PJ2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim8Q99PJ2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim8Q99PJ2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Trim8Q99PJ2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim8Q99PJ2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim8Q99PJ2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim8Q99PJ2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trim8Q99PJ2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.2■□□□□ 0.66
Trim8Q99PJ2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim8Q99PJ2 Golph3-205ENSMUST00000228671 2842 ntBASIC19.2■□□□□ 0.66
Trim8Q99PJ2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim8Q99PJ2 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.2■□□□□ 0.66
Trim8Q99PJ2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim8Q99PJ2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim8Q99PJ2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim8Q99PJ2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trim8Q99PJ2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim8Q99PJ2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.19■□□□□ 0.66
Trim8Q99PJ2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim8Q99PJ2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim8Q99PJ2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim8Q99PJ2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim8Q99PJ2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim8Q99PJ2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim8Q99PJ2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms