Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh23Q99PF4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cdh23Q99PF4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh23Q99PF4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.5■□□□□ 0.87
Cdh23Q99PF4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh23Q99PF4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh23Q99PF4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh23Q99PF4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh23Q99PF4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.5■□□□□ 0.87
Cdh23Q99PF4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh23Q99PF4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh23Q99PF4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh23Q99PF4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh23Q99PF4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh23Q99PF4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh23Q99PF4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh23Q99PF4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh23Q99PF4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh23Q99PF4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh23Q99PF4 Gm27275-201ENSMUST00000184318 272 ntBASIC20.48■□□□□ 0.87
Cdh23Q99PF4 Gm6365-201ENSMUST00000054711 744 ntBASIC20.48■□□□□ 0.87
Cdh23Q99PF4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.48■□□□□ 0.87
Cdh23Q99PF4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh23Q99PF4 Gm7290-201ENSMUST00000104990 617 ntBASIC20.48■□□□□ 0.87
Cdh23Q99PF4 Gm12918-201ENSMUST00000120234 636 ntBASIC20.48■□□□□ 0.87
Cdh23Q99PF4 Gm15710-201ENSMUST00000121821 636 ntBASIC20.48■□□□□ 0.87
Cdh23Q99PF4 Gm5075-201ENSMUST00000196916 622 ntBASIC20.48■□□□□ 0.87
Cdh23Q99PF4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cdh23Q99PF4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.48■□□□□ 0.87
Cdh23Q99PF4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.48■□□□□ 0.87
Cdh23Q99PF4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh23Q99PF4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh23Q99PF4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.47■□□□□ 0.87
Cdh23Q99PF4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh23Q99PF4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh23Q99PF4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh23Q99PF4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.47■□□□□ 0.87
Cdh23Q99PF4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh23Q99PF4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh23Q99PF4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh23Q99PF4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh23Q99PF4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh23Q99PF4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cdh23Q99PF4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.46■□□□□ 0.87
Cdh23Q99PF4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh23Q99PF4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
Cdh23Q99PF4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh23Q99PF4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.46■□□□□ 0.87
Cdh23Q99PF4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh23Q99PF4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh23Q99PF4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh23Q99PF4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh23Q99PF4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh23Q99PF4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh23Q99PF4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Cdh23Q99PF4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.45■□□□□ 0.86
Cdh23Q99PF4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.45■□□□□ 0.86
Cdh23Q99PF4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh23Q99PF4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh23Q99PF4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.45■□□□□ 0.86
Cdh23Q99PF4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh23Q99PF4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.44■□□□□ 0.86
Cdh23Q99PF4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.44■□□□□ 0.86
Cdh23Q99PF4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.43■□□□□ 0.86
Cdh23Q99PF4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh23Q99PF4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh23Q99PF4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh23Q99PF4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh23Q99PF4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh23Q99PF4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.43■□□□□ 0.86
Cdh23Q99PF4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh23Q99PF4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh23Q99PF4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.43■□□□□ 0.86
Cdh23Q99PF4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cdh23Q99PF4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh23Q99PF4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Cdh23Q99PF4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh23Q99PF4 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.42■□□□□ 0.86
Cdh23Q99PF4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.42■□□□□ 0.86
Cdh23Q99PF4 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.42■□□□□ 0.86
Cdh23Q99PF4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh23Q99PF4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Cdh23Q99PF4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.42■□□□□ 0.86
Cdh23Q99PF4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Cdh23Q99PF4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.42■□□□□ 0.86
Cdh23Q99PF4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Cdh23Q99PF4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh23Q99PF4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh23Q99PF4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.41■□□□□ 0.86
Cdh23Q99PF4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Cdh23Q99PF4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Cdh23Q99PF4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.4■□□□□ 0.86
Cdh23Q99PF4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh23Q99PF4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh23Q99PF4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh23Q99PF4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh23Q99PF4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh23Q99PF4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Cdh23Q99PF4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh23Q99PF4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms