Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SncaipQ99ME3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SncaipQ99ME3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
SncaipQ99ME3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SncaipQ99ME3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SncaipQ99ME3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SncaipQ99ME3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.39■□□□□ 0.85
SncaipQ99ME3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SncaipQ99ME3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SncaipQ99ME3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.38■□□□□ 0.85
SncaipQ99ME3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SncaipQ99ME3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SncaipQ99ME3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SncaipQ99ME3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SncaipQ99ME3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SncaipQ99ME3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SncaipQ99ME3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SncaipQ99ME3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SncaipQ99ME3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SncaipQ99ME3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SncaipQ99ME3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SncaipQ99ME3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SncaipQ99ME3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SncaipQ99ME3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SncaipQ99ME3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SncaipQ99ME3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.37■□□□□ 0.85
SncaipQ99ME3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SncaipQ99ME3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.37■□□□□ 0.85
SncaipQ99ME3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SncaipQ99ME3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SncaipQ99ME3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SncaipQ99ME3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SncaipQ99ME3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SncaipQ99ME3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SncaipQ99ME3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SncaipQ99ME3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SncaipQ99ME3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SncaipQ99ME3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SncaipQ99ME3 Golph3-202ENSMUST00000226517 2359 ntBASIC20.36■□□□□ 0.85
SncaipQ99ME3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.36■□□□□ 0.85
SncaipQ99ME3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SncaipQ99ME3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SncaipQ99ME3 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.36■□□□□ 0.85
SncaipQ99ME3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SncaipQ99ME3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SncaipQ99ME3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SncaipQ99ME3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.36■□□□□ 0.85
SncaipQ99ME3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SncaipQ99ME3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SncaipQ99ME3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SncaipQ99ME3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SncaipQ99ME3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SncaipQ99ME3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.35■□□□□ 0.85
SncaipQ99ME3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SncaipQ99ME3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
SncaipQ99ME3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.35■□□□□ 0.85
SncaipQ99ME3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
SncaipQ99ME3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SncaipQ99ME3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SncaipQ99ME3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SncaipQ99ME3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SncaipQ99ME3 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.34■□□□□ 0.85
SncaipQ99ME3 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.34■□□□□ 0.85
SncaipQ99ME3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SncaipQ99ME3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SncaipQ99ME3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SncaipQ99ME3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.34■□□□□ 0.85
SncaipQ99ME3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SncaipQ99ME3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.34■□□□□ 0.85
SncaipQ99ME3 Gm43137-201ENSMUST00000198052 594 ntBASIC20.34■□□□□ 0.85
SncaipQ99ME3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SncaipQ99ME3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.34■□□□□ 0.85
SncaipQ99ME3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.33■□□□□ 0.85
SncaipQ99ME3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SncaipQ99ME3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SncaipQ99ME3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SncaipQ99ME3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SncaipQ99ME3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SncaipQ99ME3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SncaipQ99ME3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SncaipQ99ME3 Gm12821-201ENSMUST00000120022 600 ntBASIC20.33■□□□□ 0.85
SncaipQ99ME3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SncaipQ99ME3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SncaipQ99ME3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SncaipQ99ME3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.33■□□□□ 0.84
SncaipQ99ME3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.84
SncaipQ99ME3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SncaipQ99ME3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SncaipQ99ME3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SncaipQ99ME3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SncaipQ99ME3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SncaipQ99ME3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SncaipQ99ME3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.32■□□□□ 0.84
SncaipQ99ME3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SncaipQ99ME3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SncaipQ99ME3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SncaipQ99ME3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SncaipQ99ME3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SncaipQ99ME3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SncaipQ99ME3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms