Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd3Q99LE3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd3Q99LE3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd3Q99LE3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.51■□□□□ 0.87
Lysmd3Q99LE3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lysmd3Q99LE3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lysmd3Q99LE3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Lysmd3Q99LE3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lysmd3Q99LE3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lysmd3Q99LE3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lysmd3Q99LE3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lysmd3Q99LE3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lysmd3Q99LE3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.5■□□□□ 0.87
Lysmd3Q99LE3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.5■□□□□ 0.87
Lysmd3Q99LE3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lysmd3Q99LE3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Lysmd3Q99LE3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lysmd3Q99LE3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Lysmd3Q99LE3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lysmd3Q99LE3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lysmd3Q99LE3 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.48■□□□□ 0.87
Lysmd3Q99LE3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Lysmd3Q99LE3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Lysmd3Q99LE3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Lysmd3Q99LE3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
Lysmd3Q99LE3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lysmd3Q99LE3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lysmd3Q99LE3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lysmd3Q99LE3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lysmd3Q99LE3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lysmd3Q99LE3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lysmd3Q99LE3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lysmd3Q99LE3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lysmd3Q99LE3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lysmd3Q99LE3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Lysmd3Q99LE3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lysmd3Q99LE3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lysmd3Q99LE3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lysmd3Q99LE3 Gm11421-201ENSMUST00000122124 294 ntBASIC20.46■□□□□ 0.87
Lysmd3Q99LE3 Gm18284-201ENSMUST00000172604 624 ntBASIC20.46■□□□□ 0.87
Lysmd3Q99LE3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lysmd3Q99LE3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Lysmd3Q99LE3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lysmd3Q99LE3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Lysmd3Q99LE3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Lysmd3Q99LE3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
Lysmd3Q99LE3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Lysmd3Q99LE3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Lysmd3Q99LE3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lysmd3Q99LE3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lysmd3Q99LE3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lysmd3Q99LE3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Lysmd3Q99LE3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.44■□□□□ 0.86
Lysmd3Q99LE3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Lysmd3Q99LE3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.44■□□□□ 0.86
Lysmd3Q99LE3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Lysmd3Q99LE3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd3Q99LE3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd3Q99LE3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.44■□□□□ 0.86
Lysmd3Q99LE3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.44■□□□□ 0.86
Lysmd3Q99LE3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.44■□□□□ 0.86
Lysmd3Q99LE3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd3Q99LE3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd3Q99LE3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd3Q99LE3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd3Q99LE3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd3Q99LE3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd3Q99LE3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lysmd3Q99LE3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Lysmd3Q99LE3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lysmd3Q99LE3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Lysmd3Q99LE3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Lysmd3Q99LE3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lysmd3Q99LE3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lysmd3Q99LE3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.43■□□□□ 0.86
Lysmd3Q99LE3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lysmd3Q99LE3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lysmd3Q99LE3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.43■□□□□ 0.86
Lysmd3Q99LE3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd3Q99LE3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd3Q99LE3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd3Q99LE3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd3Q99LE3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Lysmd3Q99LE3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd3Q99LE3 Gm8495-201ENSMUST00000188740 694 ntBASIC20.42■□□□□ 0.86
Lysmd3Q99LE3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.42■□□□□ 0.86
Lysmd3Q99LE3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Lysmd3Q99LE3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd3Q99LE3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Lysmd3Q99LE3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd3Q99LE3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lysmd3Q99LE3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd3Q99LE3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd3Q99LE3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd3Q99LE3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd3Q99LE3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd3Q99LE3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Lysmd3Q99LE3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.41■□□□□ 0.86
Lysmd3Q99LE3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.41■□□□□ 0.86
Lysmd3Q99LE3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms