Protein–RNA interactions for Protein: Q925H1

Trps1, Zinc finger transcription factor Trps1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trps1Q925H1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.5■□□□□ 0.87
Trps1Q925H1 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.5■□□□□ 0.87
Trps1Q925H1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trps1Q925H1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Trps1Q925H1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trps1Q925H1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trps1Q925H1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.49■□□□□ 0.87
Trps1Q925H1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trps1Q925H1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trps1Q925H1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Trps1Q925H1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Trps1Q925H1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trps1Q925H1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trps1Q925H1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Trps1Q925H1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trps1Q925H1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trps1Q925H1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trps1Q925H1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trps1Q925H1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trps1Q925H1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.48■□□□□ 0.87
Trps1Q925H1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Trps1Q925H1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trps1Q925H1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trps1Q925H1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trps1Q925H1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Trps1Q925H1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trps1Q925H1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Trps1Q925H1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trps1Q925H1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
Trps1Q925H1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.47■□□□□ 0.87
Trps1Q925H1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trps1Q925H1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trps1Q925H1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Trps1Q925H1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trps1Q925H1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trps1Q925H1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trps1Q925H1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trps1Q925H1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trps1Q925H1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trps1Q925H1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.46■□□□□ 0.87
Trps1Q925H1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trps1Q925H1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trps1Q925H1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trps1Q925H1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trps1Q925H1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Trps1Q925H1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trps1Q925H1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trps1Q925H1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.46■□□□□ 0.87
Trps1Q925H1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trps1Q925H1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trps1Q925H1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trps1Q925H1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trps1Q925H1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.45■□□□□ 0.86
Trps1Q925H1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trps1Q925H1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trps1Q925H1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trps1Q925H1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trps1Q925H1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trps1Q925H1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trps1Q925H1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Trps1Q925H1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Trps1Q925H1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trps1Q925H1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trps1Q925H1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.44■□□□□ 0.86
Trps1Q925H1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trps1Q925H1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trps1Q925H1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trps1Q925H1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.44■□□□□ 0.86
Trps1Q925H1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trps1Q925H1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.44■□□□□ 0.86
Trps1Q925H1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trps1Q925H1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trps1Q925H1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trps1Q925H1 AA386476-201ENSMUST00000098781 1665 ntBASIC20.43■□□□□ 0.86
Trps1Q925H1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.43■□□□□ 0.86
Trps1Q925H1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.43■□□□□ 0.86
Trps1Q925H1 Spcs1-204ENSMUST00000226782 949 ntBASIC20.43■□□□□ 0.86
Trps1Q925H1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trps1Q925H1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trps1Q925H1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Trps1Q925H1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Trps1Q925H1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trps1Q925H1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trps1Q925H1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trps1Q925H1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trps1Q925H1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trps1Q925H1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trps1Q925H1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trps1Q925H1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trps1Q925H1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trps1Q925H1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.42■□□□□ 0.86
Trps1Q925H1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trps1Q925H1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Trps1Q925H1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trps1Q925H1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Trps1Q925H1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trps1Q925H1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trps1Q925H1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trps1Q925H1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trps1Q925H1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms