Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pcdha11Q91Y19 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha11Q91Y19 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha11Q91Y19 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.77■□□□□ 0.92
Pcdha11Q91Y19 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha11Q91Y19 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Pcdha11Q91Y19 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha11Q91Y19 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.77■□□□□ 0.92
Pcdha11Q91Y19 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha11Q91Y19 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdha11Q91Y19 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdha11Q91Y19 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdha11Q91Y19 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha11Q91Y19 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha11Q91Y19 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
Pcdha11Q91Y19 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.76■□□□□ 0.91
Pcdha11Q91Y19 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha11Q91Y19 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha11Q91Y19 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
Pcdha11Q91Y19 Gm40848-201ENSMUST00000221998 324 ntBASIC20.76■□□□□ 0.91
Pcdha11Q91Y19 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha11Q91Y19 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha11Q91Y19 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Pcdha11Q91Y19 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha11Q91Y19 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha11Q91Y19 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha11Q91Y19 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha11Q91Y19 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.75■□□□□ 0.91
Pcdha11Q91Y19 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha11Q91Y19 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha11Q91Y19 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha11Q91Y19 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.75■□□□□ 0.91
Pcdha11Q91Y19 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha11Q91Y19 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha11Q91Y19 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha11Q91Y19 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha11Q91Y19 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha11Q91Y19 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Pcdha11Q91Y19 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha11Q91Y19 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha11Q91Y19 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha11Q91Y19 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Pcdha11Q91Y19 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Pcdha11Q91Y19 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Pcdha11Q91Y19 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha11Q91Y19 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha11Q91Y19 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Pcdha11Q91Y19 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha11Q91Y19 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha11Q91Y19 Gm43060-201ENSMUST00000200621 289 ntBASIC20.73■□□□□ 0.91
Pcdha11Q91Y19 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha11Q91Y19 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha11Q91Y19 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha11Q91Y19 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha11Q91Y19 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.73■□□□□ 0.91
Pcdha11Q91Y19 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha11Q91Y19 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha11Q91Y19 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdha11Q91Y19 Gm11421-201ENSMUST00000122124 294 ntBASIC20.72■□□□□ 0.91
Pcdha11Q91Y19 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.72■□□□□ 0.91
Pcdha11Q91Y19 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Pcdha11Q91Y19 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdha11Q91Y19 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdha11Q91Y19 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdha11Q91Y19 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdha11Q91Y19 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Pcdha11Q91Y19 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdha11Q91Y19 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdha11Q91Y19 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha11Q91Y19 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha11Q91Y19 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha11Q91Y19 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Pcdha11Q91Y19 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha11Q91Y19 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.7■□□□□ 0.9
Pcdha11Q91Y19 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha11Q91Y19 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.7■□□□□ 0.9
Pcdha11Q91Y19 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha11Q91Y19 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha11Q91Y19 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.69■□□□□ 0.9
Pcdha11Q91Y19 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdha11Q91Y19 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdha11Q91Y19 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdha11Q91Y19 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Pcdha11Q91Y19 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdha11Q91Y19 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdha11Q91Y19 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdha11Q91Y19 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdha11Q91Y19 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha11Q91Y19 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha11Q91Y19 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha11Q91Y19 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha11Q91Y19 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.68■□□□□ 0.9
Pcdha11Q91Y19 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha11Q91Y19 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdha11Q91Y19 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Pcdha11Q91Y19 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Pcdha11Q91Y19 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdha11Q91Y19 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Pcdha11Q91Y19 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Pcdha11Q91Y19 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms