Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha9Q91Y11 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.07■□□□□ 0.96
Pcdha9Q91Y11 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha9Q91Y11 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha9Q91Y11 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Pcdha9Q91Y11 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Pcdha9Q91Y11 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha9Q91Y11 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.06■□□□□ 0.96
Pcdha9Q91Y11 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha9Q91Y11 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Pcdha9Q91Y11 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha9Q91Y11 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdha9Q91Y11 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Pcdha9Q91Y11 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Pcdha9Q91Y11 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha9Q91Y11 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Pcdha9Q91Y11 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha9Q91Y11 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha9Q91Y11 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha9Q91Y11 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha9Q91Y11 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha9Q91Y11 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Pcdha9Q91Y11 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha9Q91Y11 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha9Q91Y11 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha9Q91Y11 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha9Q91Y11 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha9Q91Y11 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha9Q91Y11 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha9Q91Y11 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha9Q91Y11 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha9Q91Y11 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Pcdha9Q91Y11 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha9Q91Y11 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha9Q91Y11 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha9Q91Y11 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha9Q91Y11 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha9Q91Y11 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha9Q91Y11 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Pcdha9Q91Y11 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.03■□□□□ 0.96
Pcdha9Q91Y11 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha9Q91Y11 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha9Q91Y11 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha9Q91Y11 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha9Q91Y11 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha9Q91Y11 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha9Q91Y11 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha9Q91Y11 Gm8493-201ENSMUST00000196881 489 ntBASIC21.03■□□□□ 0.96
Pcdha9Q91Y11 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.03■□□□□ 0.96
Pcdha9Q91Y11 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha9Q91Y11 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.03■□□□□ 0.96
Pcdha9Q91Y11 Gm6139-201ENSMUST00000079261 882 ntBASIC21.03■□□□□ 0.96
Pcdha9Q91Y11 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha9Q91Y11 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha9Q91Y11 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha9Q91Y11 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha9Q91Y11 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha9Q91Y11 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha9Q91Y11 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.02■□□□□ 0.96
Pcdha9Q91Y11 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha9Q91Y11 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha9Q91Y11 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.02■□□□□ 0.96
Pcdha9Q91Y11 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.02■□□□□ 0.96
Pcdha9Q91Y11 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Pcdha9Q91Y11 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Pcdha9Q91Y11 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Pcdha9Q91Y11 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Pcdha9Q91Y11 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha9Q91Y11 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.01■□□□□ 0.95
Pcdha9Q91Y11 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha9Q91Y11 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.01■□□□□ 0.95
Pcdha9Q91Y11 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha9Q91Y11 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdha9Q91Y11 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdha9Q91Y11 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdha9Q91Y11 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21■□□□□ 0.95
Pcdha9Q91Y11 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdha9Q91Y11 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdha9Q91Y11 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha9Q91Y11 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha9Q91Y11 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcdha9Q91Y11 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha9Q91Y11 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha9Q91Y11 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcdha9Q91Y11 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha9Q91Y11 Gm43173-201ENSMUST00000202246 593 ntBASIC20.99■□□□□ 0.95
Pcdha9Q91Y11 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.99■□□□□ 0.95
Pcdha9Q91Y11 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha9Q91Y11 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha9Q91Y11 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Pcdha9Q91Y11 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha9Q91Y11 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha9Q91Y11 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha9Q91Y11 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha9Q91Y11 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Pcdha9Q91Y11 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha9Q91Y11 AA386476-201ENSMUST00000098781 1665 ntBASIC20.98■□□□□ 0.95
Pcdha9Q91Y11 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.98■□□□□ 0.95
Pcdha9Q91Y11 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Pcdha9Q91Y11 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms