Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.54■□□□□ 0.88
Pcdhb1Q91Y08 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdhb1Q91Y08 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdhb1Q91Y08 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb1Q91Y08 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb1Q91Y08 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb1Q91Y08 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb1Q91Y08 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb1Q91Y08 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Pcdhb1Q91Y08 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb1Q91Y08 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb1Q91Y08 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb1Q91Y08 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb1Q91Y08 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb1Q91Y08 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb1Q91Y08 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb1Q91Y08 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb1Q91Y08 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb1Q91Y08 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb1Q91Y08 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Pcdhb1Q91Y08 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb1Q91Y08 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb1Q91Y08 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb1Q91Y08 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Pcdhb1Q91Y08 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb1Q91Y08 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.52■□□□□ 0.87
Pcdhb1Q91Y08 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb1Q91Y08 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb1Q91Y08 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb1Q91Y08 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb1Q91Y08 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb1Q91Y08 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb1Q91Y08 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb1Q91Y08 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb1Q91Y08 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb1Q91Y08 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb1Q91Y08 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb1Q91Y08 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb1Q91Y08 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb1Q91Y08 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Pcdhb1Q91Y08 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb1Q91Y08 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb1Q91Y08 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
Pcdhb1Q91Y08 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb1Q91Y08 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdhb1Q91Y08 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhb1Q91Y08 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhb1Q91Y08 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb1Q91Y08 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb1Q91Y08 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb1Q91Y08 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb1Q91Y08 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb1Q91Y08 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb1Q91Y08 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.49■□□□□ 0.87
Pcdhb1Q91Y08 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb1Q91Y08 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.49■□□□□ 0.87
Pcdhb1Q91Y08 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhb1Q91Y08 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb1Q91Y08 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb1Q91Y08 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb1Q91Y08 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb1Q91Y08 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.48■□□□□ 0.87
Pcdhb1Q91Y08 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb1Q91Y08 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Pcdhb1Q91Y08 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb1Q91Y08 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Pcdhb1Q91Y08 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Pcdhb1Q91Y08 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Pcdhb1Q91Y08 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb1Q91Y08 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb1Q91Y08 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb1Q91Y08 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb1Q91Y08 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb1Q91Y08 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb1Q91Y08 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb1Q91Y08 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb1Q91Y08 Gm13241-201ENSMUST00000094493 780 ntBASIC20.47■□□□□ 0.87
Pcdhb1Q91Y08 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb1Q91Y08 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb1Q91Y08 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb1Q91Y08 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdhb1Q91Y08 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb1Q91Y08 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb1Q91Y08 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb1Q91Y08 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb1Q91Y08 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb1Q91Y08 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdhb1Q91Y08 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb1Q91Y08 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb1Q91Y08 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.45■□□□□ 0.86
Pcdhb1Q91Y08 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb1Q91Y08 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb1Q91Y08 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb1Q91Y08 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.45■□□□□ 0.86
Pcdhb1Q91Y08 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb1Q91Y08 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.44■□□□□ 0.86
Pcdhb1Q91Y08 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb1Q91Y08 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Pcdhb1Q91Y08 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb1Q91Y08 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms