Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb18Q91Y02 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb18Q91Y02 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb18Q91Y02 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb18Q91Y02 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb18Q91Y02 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb18Q91Y02 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb18Q91Y02 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb18Q91Y02 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb18Q91Y02 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb18Q91Y02 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.62■□□□□ 0.89
Pcdhb18Q91Y02 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb18Q91Y02 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Pcdhb18Q91Y02 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdhb18Q91Y02 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb18Q91Y02 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb18Q91Y02 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb18Q91Y02 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pcdhb18Q91Y02 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb18Q91Y02 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb18Q91Y02 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb18Q91Y02 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb18Q91Y02 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.61■□□□□ 0.89
Pcdhb18Q91Y02 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb18Q91Y02 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb18Q91Y02 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Pcdhb18Q91Y02 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.6■□□□□ 0.89
Pcdhb18Q91Y02 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.6■□□□□ 0.89
Pcdhb18Q91Y02 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb18Q91Y02 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb18Q91Y02 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pcdhb18Q91Y02 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb18Q91Y02 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb18Q91Y02 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Pcdhb18Q91Y02 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb18Q91Y02 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb18Q91Y02 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb18Q91Y02 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhb18Q91Y02 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb18Q91Y02 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb18Q91Y02 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdhb18Q91Y02 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.59■□□□□ 0.89
Pcdhb18Q91Y02 Gm9988-201ENSMUST00000069786 435 ntBASIC20.59■□□□□ 0.89
Pcdhb18Q91Y02 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhb18Q91Y02 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhb18Q91Y02 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb18Q91Y02 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb18Q91Y02 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb18Q91Y02 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb18Q91Y02 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb18Q91Y02 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb18Q91Y02 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb18Q91Y02 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Pcdhb18Q91Y02 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb18Q91Y02 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb18Q91Y02 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb18Q91Y02 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb18Q91Y02 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb18Q91Y02 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb18Q91Y02 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb18Q91Y02 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb18Q91Y02 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb18Q91Y02 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb18Q91Y02 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb18Q91Y02 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.57■□□□□ 0.88
Pcdhb18Q91Y02 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb18Q91Y02 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb18Q91Y02 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb18Q91Y02 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb18Q91Y02 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb18Q91Y02 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb18Q91Y02 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb18Q91Y02 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb18Q91Y02 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb18Q91Y02 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb18Q91Y02 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Pcdhb18Q91Y02 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.56■□□□□ 0.88
Pcdhb18Q91Y02 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb18Q91Y02 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb18Q91Y02 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb18Q91Y02 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb18Q91Y02 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb18Q91Y02 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb18Q91Y02 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.55■□□□□ 0.88
Pcdhb18Q91Y02 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb18Q91Y02 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb18Q91Y02 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb18Q91Y02 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.55■□□□□ 0.88
Pcdhb18Q91Y02 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb18Q91Y02 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb18Q91Y02 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb18Q91Y02 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhb18Q91Y02 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhb18Q91Y02 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb18Q91Y02 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb18Q91Y02 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb18Q91Y02 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb18Q91Y02 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Pcdhb18Q91Y02 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhb18Q91Y02 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms