Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdhb8Q91XZ2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb8Q91XZ2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb8Q91XZ2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pcdhb8Q91XZ2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb8Q91XZ2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb8Q91XZ2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb8Q91XZ2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb8Q91XZ2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb8Q91XZ2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb8Q91XZ2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb8Q91XZ2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb8Q91XZ2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb8Q91XZ2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb8Q91XZ2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb8Q91XZ2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb8Q91XZ2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcdhb8Q91XZ2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb8Q91XZ2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb8Q91XZ2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb8Q91XZ2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb8Q91XZ2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhb8Q91XZ2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhb8Q91XZ2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb8Q91XZ2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb8Q91XZ2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.21■□□□□ 0.67
Pcdhb8Q91XZ2 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.21■□□□□ 0.67
Pcdhb8Q91XZ2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb8Q91XZ2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhb8Q91XZ2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb8Q91XZ2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcdhb8Q91XZ2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb8Q91XZ2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhb8Q91XZ2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb8Q91XZ2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb8Q91XZ2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb8Q91XZ2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.2■□□□□ 0.66
Pcdhb8Q91XZ2 Golgb1-201ENSMUST00000023534 498 ntBASIC19.2■□□□□ 0.66
Pcdhb8Q91XZ2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb8Q91XZ2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.2■□□□□ 0.66
Pcdhb8Q91XZ2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb8Q91XZ2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb8Q91XZ2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb8Q91XZ2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb8Q91XZ2 Gm12922-201ENSMUST00000120626 809 ntBASIC19.19■□□□□ 0.66
Pcdhb8Q91XZ2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb8Q91XZ2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb8Q91XZ2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb8Q91XZ2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdhb8Q91XZ2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb8Q91XZ2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb8Q91XZ2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb8Q91XZ2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb8Q91XZ2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdhb8Q91XZ2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb8Q91XZ2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdhb8Q91XZ2 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.18■□□□□ 0.66
Pcdhb8Q91XZ2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb8Q91XZ2 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.18■□□□□ 0.66
Pcdhb8Q91XZ2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb8Q91XZ2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb8Q91XZ2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb8Q91XZ2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Pcdhb8Q91XZ2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb8Q91XZ2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb8Q91XZ2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb8Q91XZ2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Pcdhb8Q91XZ2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.17■□□□□ 0.66
Pcdhb8Q91XZ2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhb8Q91XZ2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb8Q91XZ2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb8Q91XZ2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhb8Q91XZ2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb8Q91XZ2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb8Q91XZ2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb8Q91XZ2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb8Q91XZ2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb8Q91XZ2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb8Q91XZ2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb8Q91XZ2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb8Q91XZ2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb8Q91XZ2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb8Q91XZ2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb8Q91XZ2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Pcdhb8Q91XZ2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb8Q91XZ2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhb8Q91XZ2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pcdhb8Q91XZ2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb8Q91XZ2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb8Q91XZ2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb8Q91XZ2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb8Q91XZ2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb8Q91XZ2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdhb8Q91XZ2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb8Q91XZ2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb8Q91XZ2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdhb8Q91XZ2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb8Q91XZ2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb8Q91XZ2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb8Q91XZ2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms