Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga11Q91XY8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga11Q91XY8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga11Q91XY8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga11Q91XY8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga11Q91XY8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga11Q91XY8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga11Q91XY8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga11Q91XY8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga11Q91XY8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga11Q91XY8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga11Q91XY8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga11Q91XY8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Pcdhga11Q91XY8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga11Q91XY8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga11Q91XY8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga11Q91XY8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga11Q91XY8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Pcdhga11Q91XY8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga11Q91XY8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhga11Q91XY8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga11Q91XY8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Pcdhga11Q91XY8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga11Q91XY8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga11Q91XY8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga11Q91XY8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdhga11Q91XY8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Pcdhga11Q91XY8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdhga11Q91XY8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga11Q91XY8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga11Q91XY8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhga11Q91XY8 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.94■□□□□ 0.62
Pcdhga11Q91XY8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhga11Q91XY8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhga11Q91XY8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Pcdhga11Q91XY8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhga11Q91XY8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdhga11Q91XY8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhga11Q91XY8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhga11Q91XY8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhga11Q91XY8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pcdhga11Q91XY8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.94■□□□□ 0.62
Pcdhga11Q91XY8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhga11Q91XY8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhga11Q91XY8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhga11Q91XY8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Pcdhga11Q91XY8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga11Q91XY8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga11Q91XY8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Pcdhga11Q91XY8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga11Q91XY8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga11Q91XY8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga11Q91XY8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga11Q91XY8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga11Q91XY8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga11Q91XY8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga11Q91XY8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga11Q91XY8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Pcdhga11Q91XY8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga11Q91XY8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga11Q91XY8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga11Q91XY8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhga11Q91XY8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhga11Q91XY8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdhga11Q91XY8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.92■□□□□ 0.62
Pcdhga11Q91XY8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhga11Q91XY8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhga11Q91XY8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhga11Q91XY8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhga11Q91XY8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhga11Q91XY8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhga11Q91XY8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhga11Q91XY8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.91■□□□□ 0.62
Pcdhga11Q91XY8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.91■□□□□ 0.62
Pcdhga11Q91XY8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Pcdhga11Q91XY8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhga11Q91XY8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Pcdhga11Q91XY8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhga11Q91XY8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhga11Q91XY8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.9■□□□□ 0.62
Pcdhga11Q91XY8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhga11Q91XY8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhga11Q91XY8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.9■□□□□ 0.62
Pcdhga11Q91XY8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhga11Q91XY8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pcdhga11Q91XY8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Pcdhga11Q91XY8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhga11Q91XY8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhga11Q91XY8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhga11Q91XY8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhga11Q91XY8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhga11Q91XY8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
Pcdhga11Q91XY8 Gm13241-201ENSMUST00000094493 780 ntBASIC18.89■□□□□ 0.61
Pcdhga11Q91XY8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.89■□□□□ 0.61
Pcdhga11Q91XY8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.89■□□□□ 0.61
Pcdhga11Q91XY8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhga11Q91XY8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhga11Q91XY8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhga11Q91XY8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhga11Q91XY8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 109.9 ms