Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhga3Q91XY5 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhga3Q91XY5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga3Q91XY5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga3Q91XY5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga3Q91XY5 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga3Q91XY5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga3Q91XY5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga3Q91XY5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga3Q91XY5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdhga3Q91XY5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga3Q91XY5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga3Q91XY5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhga3Q91XY5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhga3Q91XY5 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhga3Q91XY5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Pcdhga3Q91XY5 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhga3Q91XY5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhga3Q91XY5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.47■□□□□ 0.39
Pcdhga3Q91XY5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga3Q91XY5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhga3Q91XY5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga3Q91XY5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga3Q91XY5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga3Q91XY5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.46■□□□□ 0.39
Pcdhga3Q91XY5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga3Q91XY5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga3Q91XY5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga3Q91XY5 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga3Q91XY5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga3Q91XY5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga3Q91XY5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhga3Q91XY5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdhga3Q91XY5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga3Q91XY5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga3Q91XY5 Gm12922-201ENSMUST00000120626 809 ntBASIC17.45■□□□□ 0.38
Pcdhga3Q91XY5 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga3Q91XY5 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.45■□□□□ 0.38
Pcdhga3Q91XY5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga3Q91XY5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.45■□□□□ 0.38
Pcdhga3Q91XY5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga3Q91XY5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga3Q91XY5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga3Q91XY5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhga3Q91XY5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga3Q91XY5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga3Q91XY5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga3Q91XY5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga3Q91XY5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhga3Q91XY5 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.44■□□□□ 0.38
Pcdhga3Q91XY5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga3Q91XY5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga3Q91XY5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga3Q91XY5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga3Q91XY5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga3Q91XY5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga3Q91XY5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga3Q91XY5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga3Q91XY5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga3Q91XY5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga3Q91XY5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga3Q91XY5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdhga3Q91XY5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga3Q91XY5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.43■□□□□ 0.38
Pcdhga3Q91XY5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.43■□□□□ 0.38
Pcdhga3Q91XY5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga3Q91XY5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga3Q91XY5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga3Q91XY5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga3Q91XY5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga3Q91XY5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhga3Q91XY5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga3Q91XY5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga3Q91XY5 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.42■□□□□ 0.38
Pcdhga3Q91XY5 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcdhga3Q91XY5 Mir6236-201ENSMUST00000184437 123 ntBASIC17.42■□□□□ 0.38
Pcdhga3Q91XY5 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga3Q91XY5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga3Q91XY5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga3Q91XY5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga3Q91XY5 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.41■□□□□ 0.38
Pcdhga3Q91XY5 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Pcdhga3Q91XY5 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhga3Q91XY5 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhga3Q91XY5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
Pcdhga3Q91XY5 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga3Q91XY5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhga3Q91XY5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga3Q91XY5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcdhga3Q91XY5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Pcdhga3Q91XY5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhga3Q91XY5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga3Q91XY5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga3Q91XY5 Golgb1-201ENSMUST00000023534 498 ntBASIC17.4■□□□□ 0.38
Pcdhga3Q91XY5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga3Q91XY5 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga3Q91XY5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga3Q91XY5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga3Q91XY5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga3Q91XY5 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms