Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb2Q91XX7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb2Q91XX7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb2Q91XX7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb2Q91XX7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhgb2Q91XX7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb2Q91XX7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhgb2Q91XX7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb2Q91XX7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb2Q91XX7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb2Q91XX7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb2Q91XX7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb2Q91XX7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb2Q91XX7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb2Q91XX7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb2Q91XX7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb2Q91XX7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb2Q91XX7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb2Q91XX7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb2Q91XX7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb2Q91XX7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhgb2Q91XX7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb2Q91XX7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb2Q91XX7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhgb2Q91XX7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb2Q91XX7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb2Q91XX7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb2Q91XX7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Pcdhgb2Q91XX7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhgb2Q91XX7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhgb2Q91XX7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhgb2Q91XX7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.48■□□□□ 0.55
Pcdhgb2Q91XX7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.48■□□□□ 0.55
Pcdhgb2Q91XX7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb2Q91XX7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb2Q91XX7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.48■□□□□ 0.55
Pcdhgb2Q91XX7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgb2Q91XX7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb2Q91XX7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdhgb2Q91XX7 Gm13238-201ENSMUST00000117655 780 ntBASIC18.47■□□□□ 0.55
Pcdhgb2Q91XX7 Mir6236-201ENSMUST00000184437 123 ntBASIC18.47■□□□□ 0.55
Pcdhgb2Q91XX7 Gm10232-201ENSMUST00000089221 720 ntBASIC18.47■□□□□ 0.55
Pcdhgb2Q91XX7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb2Q91XX7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb2Q91XX7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb2Q91XX7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgb2Q91XX7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhgb2Q91XX7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb2Q91XX7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb2Q91XX7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb2Q91XX7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb2Q91XX7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb2Q91XX7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhgb2Q91XX7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhgb2Q91XX7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb2Q91XX7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb2Q91XX7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb2Q91XX7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhgb2Q91XX7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb2Q91XX7 Gm5921-201ENSMUST00000075898 882 ntBASIC18.46■□□□□ 0.55
Pcdhgb2Q91XX7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgb2Q91XX7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdhgb2Q91XX7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Pcdhgb2Q91XX7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb2Q91XX7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb2Q91XX7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhgb2Q91XX7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb2Q91XX7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb2Q91XX7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb2Q91XX7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb2Q91XX7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb2Q91XX7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgb2Q91XX7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb2Q91XX7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb2Q91XX7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb2Q91XX7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.44■□□□□ 0.54
Pcdhgb2Q91XX7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb2Q91XX7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgb2Q91XX7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb2Q91XX7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb2Q91XX7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb2Q91XX7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhgb2Q91XX7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhgb2Q91XX7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb2Q91XX7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb2Q91XX7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgb2Q91XX7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhgb2Q91XX7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb2Q91XX7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhgb2Q91XX7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdhgb2Q91XX7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb2Q91XX7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb2Q91XX7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgb2Q91XX7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb2Q91XX7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb2Q91XX7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb2Q91XX7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb2Q91XX7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb2Q91XX7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgb2Q91XX7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms