Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhgc5Q91XW9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhgc5Q91XW9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC22.45■■□□□ 1.18
Pcdhgc5Q91XW9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhgc5Q91XW9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhgc5Q91XW9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC22.45■■□□□ 1.18
Pcdhgc5Q91XW9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Pcdhgc5Q91XW9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Pcdhgc5Q91XW9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhgc5Q91XW9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhgc5Q91XW9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC22.44■■□□□ 1.18
Pcdhgc5Q91XW9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhgc5Q91XW9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhgc5Q91XW9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Pcdhgc5Q91XW9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhgc5Q91XW9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhgc5Q91XW9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhgc5Q91XW9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC22.43■■□□□ 1.18
Pcdhgc5Q91XW9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC22.43■■□□□ 1.18
Pcdhgc5Q91XW9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC22.43■■□□□ 1.18
Pcdhgc5Q91XW9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhgc5Q91XW9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhgc5Q91XW9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Pcdhgc5Q91XW9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgc5Q91XW9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC22.42■■□□□ 1.18
Pcdhgc5Q91XW9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgc5Q91XW9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC22.42■■□□□ 1.18
Pcdhgc5Q91XW9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC22.42■■□□□ 1.18
Pcdhgc5Q91XW9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgc5Q91XW9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgc5Q91XW9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgc5Q91XW9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhgc5Q91XW9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Pcdhgc5Q91XW9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgc5Q91XW9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgc5Q91XW9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgc5Q91XW9 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.41■■□□□ 1.18
Pcdhgc5Q91XW9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgc5Q91XW9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgc5Q91XW9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgc5Q91XW9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgc5Q91XW9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgc5Q91XW9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC22.41■■□□□ 1.18
Pcdhgc5Q91XW9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgc5Q91XW9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgc5Q91XW9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgc5Q91XW9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Pcdhgc5Q91XW9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhgc5Q91XW9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.4■■□□□ 1.18
Pcdhgc5Q91XW9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhgc5Q91XW9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhgc5Q91XW9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhgc5Q91XW9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhgc5Q91XW9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhgc5Q91XW9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhgc5Q91XW9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhgc5Q91XW9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhgc5Q91XW9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhgc5Q91XW9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhgc5Q91XW9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.39■■□□□ 1.17
Pcdhgc5Q91XW9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhgc5Q91XW9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhgc5Q91XW9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhgc5Q91XW9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhgc5Q91XW9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgc5Q91XW9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Pcdhgc5Q91XW9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgc5Q91XW9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Pcdhgc5Q91XW9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgc5Q91XW9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgc5Q91XW9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.38■■□□□ 1.17
Pcdhgc5Q91XW9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgc5Q91XW9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.38■■□□□ 1.17
Pcdhgc5Q91XW9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgc5Q91XW9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgc5Q91XW9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.38■■□□□ 1.17
Pcdhgc5Q91XW9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgc5Q91XW9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhgc5Q91XW9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgc5Q91XW9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgc5Q91XW9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.37■■□□□ 1.17
Pcdhgc5Q91XW9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Pcdhgc5Q91XW9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgc5Q91XW9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhgc5Q91XW9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
Pcdhgc5Q91XW9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgc5Q91XW9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC22.36■■□□□ 1.17
Pcdhgc5Q91XW9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgc5Q91XW9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgc5Q91XW9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Pcdhgc5Q91XW9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgc5Q91XW9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC22.36■■□□□ 1.17
Pcdhgc5Q91XW9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgc5Q91XW9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Pcdhgc5Q91XW9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgc5Q91XW9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgc5Q91XW9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgc5Q91XW9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgc5Q91XW9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhgc5Q91XW9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms