Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Notumos-201ENSMUST00000151998 2659 ntBASIC21.2■□□□□ 0.98
Lmcd1Q8VEE1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lmcd1Q8VEE1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lmcd1Q8VEE1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.19■□□□□ 0.98
Lmcd1Q8VEE1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.19■□□□□ 0.98
Lmcd1Q8VEE1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.19■□□□□ 0.98
Lmcd1Q8VEE1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.19■□□□□ 0.98
Lmcd1Q8VEE1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.19■□□□□ 0.98
Lmcd1Q8VEE1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lmcd1Q8VEE1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lmcd1Q8VEE1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lmcd1Q8VEE1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lmcd1Q8VEE1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lmcd1Q8VEE1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lmcd1Q8VEE1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lmcd1Q8VEE1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.18■□□□□ 0.98
Lmcd1Q8VEE1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lmcd1Q8VEE1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lmcd1Q8VEE1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lmcd1Q8VEE1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lmcd1Q8VEE1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lmcd1Q8VEE1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Lmcd1Q8VEE1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lmcd1Q8VEE1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Lmcd1Q8VEE1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lmcd1Q8VEE1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.17■□□□□ 0.98
Lmcd1Q8VEE1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lmcd1Q8VEE1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lmcd1Q8VEE1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.16■□□□□ 0.98
Lmcd1Q8VEE1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lmcd1Q8VEE1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lmcd1Q8VEE1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lmcd1Q8VEE1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lmcd1Q8VEE1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lmcd1Q8VEE1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lmcd1Q8VEE1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.15■□□□□ 0.98
Lmcd1Q8VEE1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lmcd1Q8VEE1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lmcd1Q8VEE1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Lmcd1Q8VEE1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lmcd1Q8VEE1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lmcd1Q8VEE1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Lmcd1Q8VEE1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lmcd1Q8VEE1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.15■□□□□ 0.98
Lmcd1Q8VEE1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lmcd1Q8VEE1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lmcd1Q8VEE1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
Lmcd1Q8VEE1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lmcd1Q8VEE1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.14■□□□□ 0.97
Lmcd1Q8VEE1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lmcd1Q8VEE1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lmcd1Q8VEE1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lmcd1Q8VEE1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lmcd1Q8VEE1 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.13■□□□□ 0.97
Lmcd1Q8VEE1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lmcd1Q8VEE1 Gm6420-201ENSMUST00000193885 723 ntBASIC21.13■□□□□ 0.97
Lmcd1Q8VEE1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Lmcd1Q8VEE1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.13■□□□□ 0.97
Lmcd1Q8VEE1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Lmcd1Q8VEE1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lmcd1Q8VEE1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lmcd1Q8VEE1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lmcd1Q8VEE1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lmcd1Q8VEE1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lmcd1Q8VEE1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lmcd1Q8VEE1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Lmcd1Q8VEE1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Lmcd1Q8VEE1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lmcd1Q8VEE1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Lmcd1Q8VEE1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Lmcd1Q8VEE1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lmcd1Q8VEE1 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.12■□□□□ 0.97
Lmcd1Q8VEE1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lmcd1Q8VEE1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Lmcd1Q8VEE1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lmcd1Q8VEE1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.11■□□□□ 0.97
Lmcd1Q8VEE1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lmcd1Q8VEE1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lmcd1Q8VEE1 Gm6576-201ENSMUST00000169678 883 ntBASIC21.11■□□□□ 0.97
Lmcd1Q8VEE1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Lmcd1Q8VEE1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lmcd1Q8VEE1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lmcd1Q8VEE1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lmcd1Q8VEE1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Lmcd1Q8VEE1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lmcd1Q8VEE1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lmcd1Q8VEE1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lmcd1Q8VEE1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lmcd1Q8VEE1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lmcd1Q8VEE1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lmcd1Q8VEE1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lmcd1Q8VEE1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lmcd1Q8VEE1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lmcd1Q8VEE1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Lmcd1Q8VEE1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lmcd1Q8VEE1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lmcd1Q8VEE1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lmcd1Q8VEE1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Lmcd1Q8VEE1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Lmcd1Q8VEE1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms