Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.38■■□□□ 1.01
Sgms1Q8VCQ6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
Sgms1Q8VCQ6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.38■■□□□ 1.01
Sgms1Q8VCQ6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sgms1Q8VCQ6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sgms1Q8VCQ6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.38■■□□□ 1.01
Sgms1Q8VCQ6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sgms1Q8VCQ6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sgms1Q8VCQ6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sgms1Q8VCQ6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Sgms1Q8VCQ6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.37■■□□□ 1.01
Sgms1Q8VCQ6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sgms1Q8VCQ6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sgms1Q8VCQ6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sgms1Q8VCQ6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sgms1Q8VCQ6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Sgms1Q8VCQ6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Sgms1Q8VCQ6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sgms1Q8VCQ6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sgms1Q8VCQ6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.36■■□□□ 1.01
Sgms1Q8VCQ6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sgms1Q8VCQ6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Sgms1Q8VCQ6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Sgms1Q8VCQ6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sgms1Q8VCQ6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sgms1Q8VCQ6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Sgms1Q8VCQ6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sgms1Q8VCQ6 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.35■■□□□ 1.01
Sgms1Q8VCQ6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.35■■□□□ 1.01
Sgms1Q8VCQ6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.35■■□□□ 1.01
Sgms1Q8VCQ6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sgms1Q8VCQ6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sgms1Q8VCQ6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sgms1Q8VCQ6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sgms1Q8VCQ6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sgms1Q8VCQ6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sgms1Q8VCQ6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.34■■□□□ 1.01
Sgms1Q8VCQ6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sgms1Q8VCQ6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sgms1Q8VCQ6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.34■■□□□ 1.01
Sgms1Q8VCQ6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.34■■□□□ 1.01
Sgms1Q8VCQ6 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.34■■□□□ 1.01
Sgms1Q8VCQ6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sgms1Q8VCQ6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sgms1Q8VCQ6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sgms1Q8VCQ6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sgms1Q8VCQ6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sgms1Q8VCQ6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sgms1Q8VCQ6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sgms1Q8VCQ6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sgms1Q8VCQ6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sgms1Q8VCQ6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.33■■□□□ 1.01
Sgms1Q8VCQ6 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.33■■□□□ 1.01
Sgms1Q8VCQ6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sgms1Q8VCQ6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Sgms1Q8VCQ6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.33■■□□□ 1
Sgms1Q8VCQ6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sgms1Q8VCQ6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.32■■□□□ 1
Sgms1Q8VCQ6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sgms1Q8VCQ6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Sgms1Q8VCQ6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.32■■□□□ 1
Sgms1Q8VCQ6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sgms1Q8VCQ6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Sgms1Q8VCQ6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sgms1Q8VCQ6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sgms1Q8VCQ6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sgms1Q8VCQ6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sgms1Q8VCQ6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Sgms1Q8VCQ6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Sgms1Q8VCQ6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.31■■□□□ 1
Sgms1Q8VCQ6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sgms1Q8VCQ6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.31■■□□□ 1
Sgms1Q8VCQ6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.31■■□□□ 1
Sgms1Q8VCQ6 AA386476-201ENSMUST00000098781 1665 ntBASIC21.31■■□□□ 1
Sgms1Q8VCQ6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sgms1Q8VCQ6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Sgms1Q8VCQ6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Sgms1Q8VCQ6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sgms1Q8VCQ6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.3■■□□□ 1
Sgms1Q8VCQ6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sgms1Q8VCQ6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Sgms1Q8VCQ6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Sgms1Q8VCQ6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.29■■□□□ 1
Sgms1Q8VCQ6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sgms1Q8VCQ6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Sgms1Q8VCQ6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sgms1Q8VCQ6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Sgms1Q8VCQ6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sgms1Q8VCQ6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.29■■□□□ 1
Sgms1Q8VCQ6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Sgms1Q8VCQ6 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.29■■□□□ 1
Sgms1Q8VCQ6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.29■■□□□ 1
Sgms1Q8VCQ6 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.29■■□□□ 1
Sgms1Q8VCQ6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Sgms1Q8VCQ6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Sgms1Q8VCQ6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sgms1Q8VCQ6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sgms1Q8VCQ6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sgms1Q8VCQ6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sgms1Q8VCQ6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms