Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.86■□□□□ 0.77
Slf1Q8R3P9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slf1Q8R3P9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slf1Q8R3P9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Slf1Q8R3P9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Slf1Q8R3P9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slf1Q8R3P9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Slf1Q8R3P9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slf1Q8R3P9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slf1Q8R3P9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slf1Q8R3P9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slf1Q8R3P9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slf1Q8R3P9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slf1Q8R3P9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slf1Q8R3P9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slf1Q8R3P9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slf1Q8R3P9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slf1Q8R3P9 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.85■□□□□ 0.77
Slf1Q8R3P9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.85■□□□□ 0.77
Slf1Q8R3P9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slf1Q8R3P9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.85■□□□□ 0.77
Slf1Q8R3P9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Slf1Q8R3P9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slf1Q8R3P9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slf1Q8R3P9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Slf1Q8R3P9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slf1Q8R3P9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Slf1Q8R3P9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Slf1Q8R3P9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slf1Q8R3P9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Slf1Q8R3P9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slf1Q8R3P9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slf1Q8R3P9 Gm5921-201ENSMUST00000075898 882 ntBASIC19.84■□□□□ 0.77
Slf1Q8R3P9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slf1Q8R3P9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Slf1Q8R3P9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Slf1Q8R3P9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Slf1Q8R3P9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Slf1Q8R3P9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Slf1Q8R3P9 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.83■□□□□ 0.77
Slf1Q8R3P9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Slf1Q8R3P9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Slf1Q8R3P9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Slf1Q8R3P9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Slf1Q8R3P9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Slf1Q8R3P9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slf1Q8R3P9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slf1Q8R3P9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Slf1Q8R3P9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.82■□□□□ 0.76
Slf1Q8R3P9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Slf1Q8R3P9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Slf1Q8R3P9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Slf1Q8R3P9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slf1Q8R3P9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Slf1Q8R3P9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Slf1Q8R3P9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slf1Q8R3P9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slf1Q8R3P9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Slf1Q8R3P9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slf1Q8R3P9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Slf1Q8R3P9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slf1Q8R3P9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slf1Q8R3P9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Slf1Q8R3P9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Slf1Q8R3P9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Slf1Q8R3P9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slf1Q8R3P9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.8■□□□□ 0.76
Slf1Q8R3P9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.8■□□□□ 0.76
Slf1Q8R3P9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slf1Q8R3P9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slf1Q8R3P9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Slf1Q8R3P9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Slf1Q8R3P9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
Slf1Q8R3P9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slf1Q8R3P9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slf1Q8R3P9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slf1Q8R3P9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slf1Q8R3P9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slf1Q8R3P9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slf1Q8R3P9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slf1Q8R3P9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slf1Q8R3P9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slf1Q8R3P9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.79■□□□□ 0.76
Slf1Q8R3P9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slf1Q8R3P9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.79■□□□□ 0.76
Slf1Q8R3P9 Gm13238-201ENSMUST00000117655 780 ntBASIC19.79■□□□□ 0.76
Slf1Q8R3P9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.79■□□□□ 0.76
Slf1Q8R3P9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slf1Q8R3P9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slf1Q8R3P9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slf1Q8R3P9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slf1Q8R3P9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slf1Q8R3P9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slf1Q8R3P9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slf1Q8R3P9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slf1Q8R3P9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slf1Q8R3P9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slf1Q8R3P9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slf1Q8R3P9 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.78■□□□□ 0.76
Slf1Q8R3P9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms