Protein–RNA interactions for Protein: Q8R3P8

Rnf113a1, Ring finger protein 113A1, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf113a1Q8R3P8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf113a1Q8R3P8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf113a1Q8R3P8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf113a1Q8R3P8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.24■□□□□ 0.35
Rnf113a1Q8R3P8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf113a1Q8R3P8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf113a1Q8R3P8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf113a1Q8R3P8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf113a1Q8R3P8 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.24■□□□□ 0.35
Rnf113a1Q8R3P8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf113a1Q8R3P8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rnf113a1Q8R3P8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf113a1Q8R3P8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf113a1Q8R3P8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf113a1Q8R3P8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf113a1Q8R3P8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf113a1Q8R3P8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf113a1Q8R3P8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf113a1Q8R3P8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf113a1Q8R3P8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf113a1Q8R3P8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.23■□□□□ 0.35
Rnf113a1Q8R3P8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rnf113a1Q8R3P8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.23■□□□□ 0.35
Rnf113a1Q8R3P8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf113a1Q8R3P8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf113a1Q8R3P8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf113a1Q8R3P8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf113a1Q8R3P8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf113a1Q8R3P8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf113a1Q8R3P8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf113a1Q8R3P8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf113a1Q8R3P8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Rnf113a1Q8R3P8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.22■□□□□ 0.35
Rnf113a1Q8R3P8 Gm43137-201ENSMUST00000198052 594 ntBASIC17.22■□□□□ 0.35
Rnf113a1Q8R3P8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rnf113a1Q8R3P8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf113a1Q8R3P8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rnf113a1Q8R3P8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.22■□□□□ 0.35
Rnf113a1Q8R3P8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf113a1Q8R3P8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf113a1Q8R3P8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf113a1Q8R3P8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rnf113a1Q8R3P8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf113a1Q8R3P8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf113a1Q8R3P8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rnf113a1Q8R3P8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf113a1Q8R3P8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Rnf113a1Q8R3P8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf113a1Q8R3P8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf113a1Q8R3P8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Rnf113a1Q8R3P8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf113a1Q8R3P8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf113a1Q8R3P8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf113a1Q8R3P8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf113a1Q8R3P8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf113a1Q8R3P8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rnf113a1Q8R3P8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rnf113a1Q8R3P8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf113a1Q8R3P8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf113a1Q8R3P8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rnf113a1Q8R3P8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf113a1Q8R3P8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf113a1Q8R3P8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rnf113a1Q8R3P8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf113a1Q8R3P8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Rnf113a1Q8R3P8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf113a1Q8R3P8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf113a1Q8R3P8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.19■□□□□ 0.34
Rnf113a1Q8R3P8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf113a1Q8R3P8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf113a1Q8R3P8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.19■□□□□ 0.34
Rnf113a1Q8R3P8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Rnf113a1Q8R3P8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.19■□□□□ 0.34
Rnf113a1Q8R3P8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf113a1Q8R3P8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rnf113a1Q8R3P8 Gm7143-201ENSMUST00000222811 859 ntBASIC17.19■□□□□ 0.34
Rnf113a1Q8R3P8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rnf113a1Q8R3P8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rnf113a1Q8R3P8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf113a1Q8R3P8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf113a1Q8R3P8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rnf113a1Q8R3P8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf113a1Q8R3P8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf113a1Q8R3P8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf113a1Q8R3P8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf113a1Q8R3P8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf113a1Q8R3P8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rnf113a1Q8R3P8 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.18■□□□□ 0.34
Rnf113a1Q8R3P8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf113a1Q8R3P8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf113a1Q8R3P8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf113a1Q8R3P8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rnf113a1Q8R3P8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf113a1Q8R3P8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rnf113a1Q8R3P8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf113a1Q8R3P8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf113a1Q8R3P8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.17■□□□□ 0.34
Rnf113a1Q8R3P8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf113a1Q8R3P8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf113a1Q8R3P8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms