Protein–RNA interactions for Protein: Q8R3G9

Tspan8, Tetraspanin-8, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan8Q8R3G9 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.51■■□□□ 1.03
Tspan8Q8R3G9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Tspan8Q8R3G9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tspan8Q8R3G9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tspan8Q8R3G9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tspan8Q8R3G9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.5■■□□□ 1.03
Tspan8Q8R3G9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tspan8Q8R3G9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tspan8Q8R3G9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.5■■□□□ 1.03
Tspan8Q8R3G9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.49■■□□□ 1.03
Tspan8Q8R3G9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tspan8Q8R3G9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
Tspan8Q8R3G9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Tspan8Q8R3G9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tspan8Q8R3G9 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.48■■□□□ 1.03
Tspan8Q8R3G9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tspan8Q8R3G9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Tspan8Q8R3G9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.48■■□□□ 1.03
Tspan8Q8R3G9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
Tspan8Q8R3G9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Tspan8Q8R3G9 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.48■■□□□ 1.03
Tspan8Q8R3G9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Tspan8Q8R3G9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Tspan8Q8R3G9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Tspan8Q8R3G9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Tspan8Q8R3G9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tspan8Q8R3G9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Tspan8Q8R3G9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Tspan8Q8R3G9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tspan8Q8R3G9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tspan8Q8R3G9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tspan8Q8R3G9 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.47■■□□□ 1.03
Tspan8Q8R3G9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.47■■□□□ 1.03
Tspan8Q8R3G9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tspan8Q8R3G9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tspan8Q8R3G9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.46■■□□□ 1.03
Tspan8Q8R3G9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tspan8Q8R3G9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Tspan8Q8R3G9 Gm5874-201ENSMUST00000096101 508 ntBASIC21.46■■□□□ 1.03
Tspan8Q8R3G9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tspan8Q8R3G9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tspan8Q8R3G9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tspan8Q8R3G9 AA386476-201ENSMUST00000098781 1665 ntBASIC21.45■■□□□ 1.02
Tspan8Q8R3G9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
Tspan8Q8R3G9 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.45■■□□□ 1.02
Tspan8Q8R3G9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tspan8Q8R3G9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tspan8Q8R3G9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tspan8Q8R3G9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Tspan8Q8R3G9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tspan8Q8R3G9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Tspan8Q8R3G9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tspan8Q8R3G9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tspan8Q8R3G9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Tspan8Q8R3G9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Tspan8Q8R3G9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Tspan8Q8R3G9 Gm27801-201ENSMUST00000184174 223 ntBASIC21.44■■□□□ 1.02
Tspan8Q8R3G9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Tspan8Q8R3G9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tspan8Q8R3G9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tspan8Q8R3G9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tspan8Q8R3G9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tspan8Q8R3G9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tspan8Q8R3G9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tspan8Q8R3G9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.43■■□□□ 1.02
Tspan8Q8R3G9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tspan8Q8R3G9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tspan8Q8R3G9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.43■■□□□ 1.02
Tspan8Q8R3G9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tspan8Q8R3G9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tspan8Q8R3G9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tspan8Q8R3G9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tspan8Q8R3G9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tspan8Q8R3G9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tspan8Q8R3G9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tspan8Q8R3G9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tspan8Q8R3G9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tspan8Q8R3G9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tspan8Q8R3G9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tspan8Q8R3G9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tspan8Q8R3G9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tspan8Q8R3G9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tspan8Q8R3G9 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.41■■□□□ 1.02
Tspan8Q8R3G9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.41■■□□□ 1.02
Tspan8Q8R3G9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tspan8Q8R3G9 Gm10849-201ENSMUST00000100397 618 ntBASIC21.41■■□□□ 1.02
Tspan8Q8R3G9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.41■■□□□ 1.02
Tspan8Q8R3G9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tspan8Q8R3G9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tspan8Q8R3G9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tspan8Q8R3G9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tspan8Q8R3G9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tspan8Q8R3G9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.4■■□□□ 1.02
Tspan8Q8R3G9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tspan8Q8R3G9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tspan8Q8R3G9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Tspan8Q8R3G9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Tspan8Q8R3G9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.39■■□□□ 1.01
Tspan8Q8R3G9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tspan8Q8R3G9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms