Protein–RNA interactions for Protein: Q8R2I0

Foxe1, Forkhead box protein E1, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxe1Q8R2I0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Foxe1Q8R2I0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.57■□□□□ 0.88
Foxe1Q8R2I0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Foxe1Q8R2I0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Foxe1Q8R2I0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Foxe1Q8R2I0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Foxe1Q8R2I0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Foxe1Q8R2I0 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.57■□□□□ 0.88
Foxe1Q8R2I0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Foxe1Q8R2I0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxe1Q8R2I0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxe1Q8R2I0 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.56■□□□□ 0.88
Foxe1Q8R2I0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Foxe1Q8R2I0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxe1Q8R2I0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Foxe1Q8R2I0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxe1Q8R2I0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxe1Q8R2I0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxe1Q8R2I0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxe1Q8R2I0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Foxe1Q8R2I0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Foxe1Q8R2I0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Foxe1Q8R2I0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Foxe1Q8R2I0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.55■□□□□ 0.88
Foxe1Q8R2I0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Foxe1Q8R2I0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Foxe1Q8R2I0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Foxe1Q8R2I0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Foxe1Q8R2I0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Foxe1Q8R2I0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxe1Q8R2I0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.54■□□□□ 0.88
Foxe1Q8R2I0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxe1Q8R2I0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxe1Q8R2I0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxe1Q8R2I0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.54■□□□□ 0.88
Foxe1Q8R2I0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Foxe1Q8R2I0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Foxe1Q8R2I0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxe1Q8R2I0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Foxe1Q8R2I0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxe1Q8R2I0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Foxe1Q8R2I0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxe1Q8R2I0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxe1Q8R2I0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxe1Q8R2I0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Foxe1Q8R2I0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxe1Q8R2I0 Gm13146-201ENSMUST00000118508 780 ntBASIC20.53■□□□□ 0.88
Foxe1Q8R2I0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.53■□□□□ 0.88
Foxe1Q8R2I0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.53■□□□□ 0.88
Foxe1Q8R2I0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxe1Q8R2I0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxe1Q8R2I0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxe1Q8R2I0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Foxe1Q8R2I0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Foxe1Q8R2I0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.53■□□□□ 0.88
Foxe1Q8R2I0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Foxe1Q8R2I0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Foxe1Q8R2I0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Foxe1Q8R2I0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Foxe1Q8R2I0 Gm6211-202ENSMUST00000167849 925 ntBASIC20.52■□□□□ 0.88
Foxe1Q8R2I0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.52■□□□□ 0.88
Foxe1Q8R2I0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Foxe1Q8R2I0 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.52■□□□□ 0.88
Foxe1Q8R2I0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.52■□□□□ 0.88
Foxe1Q8R2I0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Foxe1Q8R2I0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Foxe1Q8R2I0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.51■□□□□ 0.87
Foxe1Q8R2I0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxe1Q8R2I0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Foxe1Q8R2I0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.51■□□□□ 0.87
Foxe1Q8R2I0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.51■□□□□ 0.87
Foxe1Q8R2I0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxe1Q8R2I0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Foxe1Q8R2I0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxe1Q8R2I0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxe1Q8R2I0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Foxe1Q8R2I0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxe1Q8R2I0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Foxe1Q8R2I0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Foxe1Q8R2I0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Foxe1Q8R2I0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Foxe1Q8R2I0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.5■□□□□ 0.87
Foxe1Q8R2I0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Foxe1Q8R2I0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Foxe1Q8R2I0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Foxe1Q8R2I0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Foxe1Q8R2I0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Foxe1Q8R2I0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Foxe1Q8R2I0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Foxe1Q8R2I0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Foxe1Q8R2I0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Foxe1Q8R2I0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.49■□□□□ 0.87
Foxe1Q8R2I0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Foxe1Q8R2I0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Foxe1Q8R2I0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Foxe1Q8R2I0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Foxe1Q8R2I0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Foxe1Q8R2I0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Foxe1Q8R2I0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.48■□□□□ 0.87
Foxe1Q8R2I0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms