Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tm6sf2Q8R1J1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tm6sf2Q8R1J1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tm6sf2Q8R1J1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.55■□□□□ 0.56
Tm6sf2Q8R1J1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tm6sf2Q8R1J1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
Tm6sf2Q8R1J1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Tm6sf2Q8R1J1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.55■□□□□ 0.56
Tm6sf2Q8R1J1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tm6sf2Q8R1J1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tm6sf2Q8R1J1 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.55■□□□□ 0.56
Tm6sf2Q8R1J1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tm6sf2Q8R1J1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tm6sf2Q8R1J1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tm6sf2Q8R1J1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.54■□□□□ 0.56
Tm6sf2Q8R1J1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tm6sf2Q8R1J1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tm6sf2Q8R1J1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tm6sf2Q8R1J1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tm6sf2Q8R1J1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.54■□□□□ 0.56
Tm6sf2Q8R1J1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tm6sf2Q8R1J1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.54■□□□□ 0.56
Tm6sf2Q8R1J1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.53■□□□□ 0.56
Tm6sf2Q8R1J1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Tm6sf2Q8R1J1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tm6sf2Q8R1J1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tm6sf2Q8R1J1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
Tm6sf2Q8R1J1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tm6sf2Q8R1J1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
Tm6sf2Q8R1J1 Smad6-203ENSMUST00000179458 273 ntBASIC18.53■□□□□ 0.56
Tm6sf2Q8R1J1 Gm40848-201ENSMUST00000221998 324 ntBASIC18.53■□□□□ 0.56
Tm6sf2Q8R1J1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tm6sf2Q8R1J1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tm6sf2Q8R1J1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Tm6sf2Q8R1J1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tm6sf2Q8R1J1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tm6sf2Q8R1J1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tm6sf2Q8R1J1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tm6sf2Q8R1J1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tm6sf2Q8R1J1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tm6sf2Q8R1J1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tm6sf2Q8R1J1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Tm6sf2Q8R1J1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.52■□□□□ 0.56
Tm6sf2Q8R1J1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tm6sf2Q8R1J1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Tm6sf2Q8R1J1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tm6sf2Q8R1J1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tm6sf2Q8R1J1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tm6sf2Q8R1J1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Tm6sf2Q8R1J1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tm6sf2Q8R1J1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tm6sf2Q8R1J1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.51■□□□□ 0.55
Tm6sf2Q8R1J1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tm6sf2Q8R1J1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Tm6sf2Q8R1J1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tm6sf2Q8R1J1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tm6sf2Q8R1J1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tm6sf2Q8R1J1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tm6sf2Q8R1J1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Tm6sf2Q8R1J1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Tm6sf2Q8R1J1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tm6sf2Q8R1J1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tm6sf2Q8R1J1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Tm6sf2Q8R1J1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.5■□□□□ 0.55
Tm6sf2Q8R1J1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tm6sf2Q8R1J1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.49■□□□□ 0.55
Tm6sf2Q8R1J1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.49■□□□□ 0.55
Tm6sf2Q8R1J1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tm6sf2Q8R1J1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.49■□□□□ 0.55
Tm6sf2Q8R1J1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
Tm6sf2Q8R1J1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tm6sf2Q8R1J1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tm6sf2Q8R1J1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tm6sf2Q8R1J1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tm6sf2Q8R1J1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tm6sf2Q8R1J1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Tm6sf2Q8R1J1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tm6sf2Q8R1J1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tm6sf2Q8R1J1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tm6sf2Q8R1J1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Tm6sf2Q8R1J1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tm6sf2Q8R1J1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tm6sf2Q8R1J1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tm6sf2Q8R1J1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tm6sf2Q8R1J1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tm6sf2Q8R1J1 Gm43060-201ENSMUST00000200621 289 ntBASIC18.47■□□□□ 0.55
Tm6sf2Q8R1J1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tm6sf2Q8R1J1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.47■□□□□ 0.55
Tm6sf2Q8R1J1 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.47■□□□□ 0.55
Tm6sf2Q8R1J1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tm6sf2Q8R1J1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.47■□□□□ 0.55
Tm6sf2Q8R1J1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.46■□□□□ 0.55
Tm6sf2Q8R1J1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tm6sf2Q8R1J1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tm6sf2Q8R1J1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tm6sf2Q8R1J1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Tm6sf2Q8R1J1 Gm11421-201ENSMUST00000122124 294 ntBASIC18.46■□□□□ 0.55
Tm6sf2Q8R1J1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tm6sf2Q8R1J1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tm6sf2Q8R1J1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms