Protein–RNA interactions for Protein: Q8N7N6

Traf3ip2, TRAF3-interacting protein 2, mousemouse

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3ip2Q8N7N6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Traf3ip2Q8N7N6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Traf3ip2Q8N7N6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.52■□□□□ 0.88
Traf3ip2Q8N7N6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.52■□□□□ 0.88
Traf3ip2Q8N7N6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Traf3ip2Q8N7N6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Traf3ip2Q8N7N6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Traf3ip2Q8N7N6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Traf3ip2Q8N7N6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Traf3ip2Q8N7N6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Traf3ip2Q8N7N6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Traf3ip2Q8N7N6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Traf3ip2Q8N7N6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Traf3ip2Q8N7N6 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.51■□□□□ 0.87
Traf3ip2Q8N7N6 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.51■□□□□ 0.87
Traf3ip2Q8N7N6 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.51■□□□□ 0.87
Traf3ip2Q8N7N6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
Traf3ip2Q8N7N6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Traf3ip2Q8N7N6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Traf3ip2Q8N7N6 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.5■□□□□ 0.87
Traf3ip2Q8N7N6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Traf3ip2Q8N7N6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Traf3ip2Q8N7N6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Traf3ip2Q8N7N6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Traf3ip2Q8N7N6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Traf3ip2Q8N7N6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.49■□□□□ 0.87
Traf3ip2Q8N7N6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Traf3ip2Q8N7N6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.49■□□□□ 0.87
Traf3ip2Q8N7N6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Traf3ip2Q8N7N6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Traf3ip2Q8N7N6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Traf3ip2Q8N7N6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Traf3ip2Q8N7N6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Traf3ip2Q8N7N6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.49■□□□□ 0.87
Traf3ip2Q8N7N6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Traf3ip2Q8N7N6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.48■□□□□ 0.87
Traf3ip2Q8N7N6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Traf3ip2Q8N7N6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Traf3ip2Q8N7N6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Traf3ip2Q8N7N6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
Traf3ip2Q8N7N6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Traf3ip2Q8N7N6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Traf3ip2Q8N7N6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Traf3ip2Q8N7N6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Traf3ip2Q8N7N6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Traf3ip2Q8N7N6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Traf3ip2Q8N7N6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Traf3ip2Q8N7N6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Traf3ip2Q8N7N6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Traf3ip2Q8N7N6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.47■□□□□ 0.87
Traf3ip2Q8N7N6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Traf3ip2Q8N7N6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Traf3ip2Q8N7N6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Traf3ip2Q8N7N6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.47■□□□□ 0.87
Traf3ip2Q8N7N6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Traf3ip2Q8N7N6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Traf3ip2Q8N7N6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Traf3ip2Q8N7N6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Traf3ip2Q8N7N6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Traf3ip2Q8N7N6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.46■□□□□ 0.87
Traf3ip2Q8N7N6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Traf3ip2Q8N7N6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Traf3ip2Q8N7N6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Traf3ip2Q8N7N6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Traf3ip2Q8N7N6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Traf3ip2Q8N7N6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Traf3ip2Q8N7N6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Traf3ip2Q8N7N6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Traf3ip2Q8N7N6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Traf3ip2Q8N7N6 Gm27801-201ENSMUST00000184174 223 ntBASIC20.45■□□□□ 0.86
Traf3ip2Q8N7N6 Gm42642-201ENSMUST00000200683 355 ntBASIC20.45■□□□□ 0.86
Traf3ip2Q8N7N6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.45■□□□□ 0.86
Traf3ip2Q8N7N6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.45■□□□□ 0.86
Traf3ip2Q8N7N6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Traf3ip2Q8N7N6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Traf3ip2Q8N7N6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.45■□□□□ 0.86
Traf3ip2Q8N7N6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Traf3ip2Q8N7N6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Traf3ip2Q8N7N6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.44■□□□□ 0.86
Traf3ip2Q8N7N6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
Traf3ip2Q8N7N6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Traf3ip2Q8N7N6 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.44■□□□□ 0.86
Traf3ip2Q8N7N6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Traf3ip2Q8N7N6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Traf3ip2Q8N7N6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Traf3ip2Q8N7N6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Traf3ip2Q8N7N6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Traf3ip2Q8N7N6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.43■□□□□ 0.86
Traf3ip2Q8N7N6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.43■□□□□ 0.86
Traf3ip2Q8N7N6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Traf3ip2Q8N7N6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Traf3ip2Q8N7N6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Traf3ip2Q8N7N6 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.43■□□□□ 0.86
Traf3ip2Q8N7N6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Traf3ip2Q8N7N6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Traf3ip2Q8N7N6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Traf3ip2Q8N7N6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Traf3ip2Q8N7N6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.42■□□□□ 0.86
Traf3ip2Q8N7N6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Traf3ip2Q8N7N6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms