Protein–RNA interactions for Protein: Q8CIG3

Kdm1b, Lysine-specific histone demethylase 1B, mousemouse

Predictions only

Length 826 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1bQ8CIG3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Kdm1bQ8CIG3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm1bQ8CIG3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm1bQ8CIG3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm1bQ8CIG3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Kdm1bQ8CIG3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm1bQ8CIG3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Kdm1bQ8CIG3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.55■□□□□ 0.88
Kdm1bQ8CIG3 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.55■□□□□ 0.88
Kdm1bQ8CIG3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm1bQ8CIG3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm1bQ8CIG3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm1bQ8CIG3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.54■□□□□ 0.88
Kdm1bQ8CIG3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm1bQ8CIG3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.54■□□□□ 0.88
Kdm1bQ8CIG3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.54■□□□□ 0.88
Kdm1bQ8CIG3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Kdm1bQ8CIG3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm1bQ8CIG3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm1bQ8CIG3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm1bQ8CIG3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm1bQ8CIG3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Kdm1bQ8CIG3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Kdm1bQ8CIG3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm1bQ8CIG3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm1bQ8CIG3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm1bQ8CIG3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Kdm1bQ8CIG3 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.53■□□□□ 0.88
Kdm1bQ8CIG3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.52■□□□□ 0.88
Kdm1bQ8CIG3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Kdm1bQ8CIG3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Kdm1bQ8CIG3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.51■□□□□ 0.87
Kdm1bQ8CIG3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.51■□□□□ 0.87
Kdm1bQ8CIG3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm1bQ8CIG3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Kdm1bQ8CIG3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm1bQ8CIG3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.51■□□□□ 0.87
Kdm1bQ8CIG3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm1bQ8CIG3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Kdm1bQ8CIG3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kdm1bQ8CIG3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kdm1bQ8CIG3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Kdm1bQ8CIG3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.5■□□□□ 0.87
Kdm1bQ8CIG3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Kdm1bQ8CIG3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kdm1bQ8CIG3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Kdm1bQ8CIG3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.49■□□□□ 0.87
Kdm1bQ8CIG3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kdm1bQ8CIG3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Kdm1bQ8CIG3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.49■□□□□ 0.87
Kdm1bQ8CIG3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm1bQ8CIG3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm1bQ8CIG3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm1bQ8CIG3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm1bQ8CIG3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm1bQ8CIG3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm1bQ8CIG3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm1bQ8CIG3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.48■□□□□ 0.87
Kdm1bQ8CIG3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.48■□□□□ 0.87
Kdm1bQ8CIG3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm1bQ8CIG3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
Kdm1bQ8CIG3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm1bQ8CIG3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm1bQ8CIG3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm1bQ8CIG3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Kdm1bQ8CIG3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Kdm1bQ8CIG3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Kdm1bQ8CIG3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Kdm1bQ8CIG3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Kdm1bQ8CIG3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Kdm1bQ8CIG3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Kdm1bQ8CIG3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Kdm1bQ8CIG3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Kdm1bQ8CIG3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Kdm1bQ8CIG3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Kdm1bQ8CIG3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Kdm1bQ8CIG3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Kdm1bQ8CIG3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Kdm1bQ8CIG3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.45■□□□□ 0.86
Kdm1bQ8CIG3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.45■□□□□ 0.86
Kdm1bQ8CIG3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.45■□□□□ 0.86
Kdm1bQ8CIG3 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.45■□□□□ 0.86
Kdm1bQ8CIG3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Kdm1bQ8CIG3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Kdm1bQ8CIG3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Kdm1bQ8CIG3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Kdm1bQ8CIG3 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.44■□□□□ 0.86
Kdm1bQ8CIG3 Iqck-206ENSMUST00000208658 2891 ntBASIC20.44■□□□□ 0.86
Kdm1bQ8CIG3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kdm1bQ8CIG3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Kdm1bQ8CIG3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Kdm1bQ8CIG3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Kdm1bQ8CIG3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Kdm1bQ8CIG3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Kdm1bQ8CIG3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kdm1bQ8CIG3 Gm9847-201ENSMUST00000052528 599 ntBASIC20.44■□□□□ 0.86
Kdm1bQ8CIG3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kdm1bQ8CIG3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Kdm1bQ8CIG3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Kdm1bQ8CIG3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 1620.7 ms