Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.79■□□□□ 0.76
Clip4Q8CI96 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip4Q8CI96 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clip4Q8CI96 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip4Q8CI96 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip4Q8CI96 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip4Q8CI96 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.78■□□□□ 0.76
Clip4Q8CI96 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip4Q8CI96 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clip4Q8CI96 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clip4Q8CI96 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.78■□□□□ 0.76
Clip4Q8CI96 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clip4Q8CI96 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Clip4Q8CI96 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clip4Q8CI96 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clip4Q8CI96 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Clip4Q8CI96 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Clip4Q8CI96 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.77■□□□□ 0.76
Clip4Q8CI96 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.77■□□□□ 0.76
Clip4Q8CI96 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clip4Q8CI96 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clip4Q8CI96 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.77■□□□□ 0.76
Clip4Q8CI96 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Clip4Q8CI96 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Clip4Q8CI96 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Clip4Q8CI96 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clip4Q8CI96 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clip4Q8CI96 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Clip4Q8CI96 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clip4Q8CI96 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Clip4Q8CI96 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clip4Q8CI96 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clip4Q8CI96 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clip4Q8CI96 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Clip4Q8CI96 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Clip4Q8CI96 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Clip4Q8CI96 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Clip4Q8CI96 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Clip4Q8CI96 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clip4Q8CI96 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clip4Q8CI96 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.75■□□□□ 0.75
Clip4Q8CI96 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clip4Q8CI96 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.75■□□□□ 0.75
Clip4Q8CI96 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clip4Q8CI96 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clip4Q8CI96 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clip4Q8CI96 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.74■□□□□ 0.75
Clip4Q8CI96 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clip4Q8CI96 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Clip4Q8CI96 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clip4Q8CI96 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.73■□□□□ 0.75
Clip4Q8CI96 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clip4Q8CI96 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.73■□□□□ 0.75
Clip4Q8CI96 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Clip4Q8CI96 Gm15039-201ENSMUST00000118914 875 ntBASIC19.73■□□□□ 0.75
Clip4Q8CI96 Gm12821-201ENSMUST00000120022 600 ntBASIC19.73■□□□□ 0.75
Clip4Q8CI96 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clip4Q8CI96 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Clip4Q8CI96 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.73■□□□□ 0.75
Clip4Q8CI96 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.73■□□□□ 0.75
Clip4Q8CI96 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clip4Q8CI96 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clip4Q8CI96 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clip4Q8CI96 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.73■□□□□ 0.75
Clip4Q8CI96 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clip4Q8CI96 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip4Q8CI96 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clip4Q8CI96 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip4Q8CI96 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip4Q8CI96 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip4Q8CI96 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip4Q8CI96 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Clip4Q8CI96 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip4Q8CI96 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
Clip4Q8CI96 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip4Q8CI96 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip4Q8CI96 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip4Q8CI96 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip4Q8CI96 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clip4Q8CI96 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clip4Q8CI96 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clip4Q8CI96 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clip4Q8CI96 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clip4Q8CI96 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clip4Q8CI96 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clip4Q8CI96 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clip4Q8CI96 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clip4Q8CI96 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clip4Q8CI96 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clip4Q8CI96 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clip4Q8CI96 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip4Q8CI96 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Clip4Q8CI96 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip4Q8CI96 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip4Q8CI96 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Clip4Q8CI96 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clip4Q8CI96 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clip4Q8CI96 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clip4Q8CI96 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clip4Q8CI96 Gm27454-201ENSMUST00000185090 204 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms