Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vps50Q8CI71 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.26■□□□□ 0.67
Vps50Q8CI71 Gm9870-201ENSMUST00000063874 645 ntBASIC19.26■□□□□ 0.67
Vps50Q8CI71 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps50Q8CI71 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps50Q8CI71 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vps50Q8CI71 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.26■□□□□ 0.67
Vps50Q8CI71 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Vps50Q8CI71 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps50Q8CI71 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps50Q8CI71 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps50Q8CI71 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps50Q8CI71 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps50Q8CI71 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Vps50Q8CI71 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps50Q8CI71 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps50Q8CI71 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.24■□□□□ 0.67
Vps50Q8CI71 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Vps50Q8CI71 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps50Q8CI71 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps50Q8CI71 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.24■□□□□ 0.67
Vps50Q8CI71 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps50Q8CI71 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps50Q8CI71 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Vps50Q8CI71 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps50Q8CI71 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps50Q8CI71 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Vps50Q8CI71 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.23■□□□□ 0.67
Vps50Q8CI71 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps50Q8CI71 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vps50Q8CI71 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.23■□□□□ 0.67
Vps50Q8CI71 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps50Q8CI71 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.23■□□□□ 0.67
Vps50Q8CI71 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.23■□□□□ 0.67
Vps50Q8CI71 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps50Q8CI71 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps50Q8CI71 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps50Q8CI71 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vps50Q8CI71 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps50Q8CI71 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps50Q8CI71 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps50Q8CI71 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Vps50Q8CI71 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps50Q8CI71 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps50Q8CI71 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps50Q8CI71 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Vps50Q8CI71 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps50Q8CI71 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps50Q8CI71 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps50Q8CI71 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps50Q8CI71 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.21■□□□□ 0.67
Vps50Q8CI71 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vps50Q8CI71 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps50Q8CI71 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps50Q8CI71 Gm21956-201ENSMUST00000179946 522 ntBASIC19.21■□□□□ 0.67
Vps50Q8CI71 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vps50Q8CI71 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.21■□□□□ 0.67
Vps50Q8CI71 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps50Q8CI71 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.2■□□□□ 0.66
Vps50Q8CI71 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps50Q8CI71 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps50Q8CI71 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vps50Q8CI71 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
Vps50Q8CI71 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps50Q8CI71 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps50Q8CI71 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.2■□□□□ 0.66
Vps50Q8CI71 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vps50Q8CI71 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps50Q8CI71 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps50Q8CI71 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps50Q8CI71 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps50Q8CI71 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps50Q8CI71 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps50Q8CI71 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.19■□□□□ 0.66
Vps50Q8CI71 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Vps50Q8CI71 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Vps50Q8CI71 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps50Q8CI71 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Vps50Q8CI71 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps50Q8CI71 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Vps50Q8CI71 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Vps50Q8CI71 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps50Q8CI71 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps50Q8CI71 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps50Q8CI71 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.18■□□□□ 0.66
Vps50Q8CI71 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps50Q8CI71 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps50Q8CI71 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps50Q8CI71 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps50Q8CI71 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.18■□□□□ 0.66
Vps50Q8CI71 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps50Q8CI71 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps50Q8CI71 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vps50Q8CI71 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.17■□□□□ 0.66
Vps50Q8CI71 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.17■□□□□ 0.66
Vps50Q8CI71 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Vps50Q8CI71 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.17■□□□□ 0.66
Vps50Q8CI71 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Vps50Q8CI71 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
Vps50Q8CI71 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms