Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
Rab11fip3Q8CHD8 Gm10033-202ENSMUST00000211874 928 ntBASIC25.65■■□□□ 1.7
Rab11fip3Q8CHD8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Rab11fip3Q8CHD8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Rab11fip3Q8CHD8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC25.64■■□□□ 1.7
Rab11fip3Q8CHD8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Rab11fip3Q8CHD8 Gm15043-201ENSMUST00000118843 1543 ntBASIC25.64■■□□□ 1.7
Rab11fip3Q8CHD8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
Rab11fip3Q8CHD8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Rab11fip3Q8CHD8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Rab11fip3Q8CHD8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Rab11fip3Q8CHD8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Rab11fip3Q8CHD8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Rab11fip3Q8CHD8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rab11fip3Q8CHD8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC25.63■■□□□ 1.69
Rab11fip3Q8CHD8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rab11fip3Q8CHD8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Rab11fip3Q8CHD8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Rab11fip3Q8CHD8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Rab11fip3Q8CHD8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC25.62■■□□□ 1.69
Rab11fip3Q8CHD8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Rab11fip3Q8CHD8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
Rab11fip3Q8CHD8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Rab11fip3Q8CHD8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC25.62■■□□□ 1.69
Rab11fip3Q8CHD8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Rab11fip3Q8CHD8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
Rab11fip3Q8CHD8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Rab11fip3Q8CHD8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Rab11fip3Q8CHD8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC25.61■■□□□ 1.69
Rab11fip3Q8CHD8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
Rab11fip3Q8CHD8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rab11fip3Q8CHD8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC25.61■■□□□ 1.69
Rab11fip3Q8CHD8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rab11fip3Q8CHD8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Rab11fip3Q8CHD8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rab11fip3Q8CHD8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Rab11fip3Q8CHD8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Rab11fip3Q8CHD8 AV356131-201ENSMUST00000206201 750 ntBASIC25.6■■□□□ 1.69
Rab11fip3Q8CHD8 Gm9988-201ENSMUST00000069786 435 ntBASIC25.6■■□□□ 1.69
Rab11fip3Q8CHD8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Rab11fip3Q8CHD8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Rab11fip3Q8CHD8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rab11fip3Q8CHD8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rab11fip3Q8CHD8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC25.59■■□□□ 1.69
Rab11fip3Q8CHD8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rab11fip3Q8CHD8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Rab11fip3Q8CHD8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Rab11fip3Q8CHD8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC25.59■■□□□ 1.69
Rab11fip3Q8CHD8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC25.59■■□□□ 1.69
Rab11fip3Q8CHD8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Rab11fip3Q8CHD8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
Rab11fip3Q8CHD8 Gm38160-201ENSMUST00000193090 2499 ntBASIC25.58■■□□□ 1.69
Rab11fip3Q8CHD8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
Rab11fip3Q8CHD8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
Rab11fip3Q8CHD8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Rab11fip3Q8CHD8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC25.58■■□□□ 1.69
Rab11fip3Q8CHD8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Rab11fip3Q8CHD8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Rab11fip3Q8CHD8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.68
Rab11fip3Q8CHD8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Rab11fip3Q8CHD8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rab11fip3Q8CHD8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC25.57■■□□□ 1.68
Rab11fip3Q8CHD8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Rab11fip3Q8CHD8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rab11fip3Q8CHD8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rab11fip3Q8CHD8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rab11fip3Q8CHD8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Rab11fip3Q8CHD8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Rab11fip3Q8CHD8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
Rab11fip3Q8CHD8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC25.56■■□□□ 1.68
Rab11fip3Q8CHD8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rab11fip3Q8CHD8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rab11fip3Q8CHD8 Gm43006-201ENSMUST00000197702 1602 ntBASIC25.55■■□□□ 1.68
Rab11fip3Q8CHD8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Rab11fip3Q8CHD8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rab11fip3Q8CHD8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rab11fip3Q8CHD8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rab11fip3Q8CHD8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Rab11fip3Q8CHD8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rab11fip3Q8CHD8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Rab11fip3Q8CHD8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rab11fip3Q8CHD8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC25.55■■□□□ 1.68
Rab11fip3Q8CHD8 AC154266.1-201ENSMUST00000223190 503 ntBASIC25.55■■□□□ 1.68
Rab11fip3Q8CHD8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rab11fip3Q8CHD8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC25.55■■□□□ 1.68
Rab11fip3Q8CHD8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rab11fip3Q8CHD8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Rab11fip3Q8CHD8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Rab11fip3Q8CHD8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rab11fip3Q8CHD8 Gm37035-201ENSMUST00000194809 2148 ntBASIC25.54■■□□□ 1.68
Rab11fip3Q8CHD8 Gm13234-201ENSMUST00000120010 747 ntBASIC25.54■■□□□ 1.68
Rab11fip3Q8CHD8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC25.54■■□□□ 1.68
Rab11fip3Q8CHD8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rab11fip3Q8CHD8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rab11fip3Q8CHD8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Rab11fip3Q8CHD8 AA386476-201ENSMUST00000098781 1665 ntBASIC25.54■■□□□ 1.68
Rab11fip3Q8CHD8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Rab11fip3Q8CHD8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
Rab11fip3Q8CHD8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Rab11fip3Q8CHD8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms